RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 FGD2Q7Z6J4 655 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 SRBD1Q8N5C6 995 aaKnown RBP13.25□□□□□ -0.29
USP38-201ENST00000307017 RNF149Q8NC42 400 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 JADE3Q92613 823 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 SEPT5Q99719 369 aaPredicted RBP13.25□□□□□ -0.29
USP38-201ENST00000307017 COPRSQ9NQ92 184 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 MROH7-TTC4A0A0A0MT08 1334 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 H0Y626 953 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 STRNO43815 780 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 TRIM16O95361 564 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 EFHC2Q5JST6 749 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 DENND5BQ6ZUT9 1274 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 KLK14Q9P0G3 267 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 KCNG1Q9UIX4 513 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 UGGT1Q9NYU2 1555 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 EIF3HO15372 352 aaKnown RBP eCLIP13.25□□□□□ -0.29
USP38-201ENST00000307017 S100A5P33763 92 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 PTPN7P35236 360 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 USP49Q70CQ1 688 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 TRPM8Q7Z2W7 1104 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 SLC10A4Q96EP9 437 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 GCC2Q8IWJ2 1684 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 C5orf58C9J3I9 102 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 ZBTB5O15062 677 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 KCNT1Q5JUK3 1230 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 C10orf53Q8N6V4 93 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 SH3GL2Q99962 352 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 CYP26B1Q9NR63 512 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 CDYLQ9Y232 598 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 ZNF335Q9H4Z2 1342 aaPredicted RBP13.25□□□□□ -0.29
USP38-201ENST00000307017 IQCMA0A1B0GVH7 501 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 CIAO1O76071 339 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 CAPN1P07384 714 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 CCZ1BP86790 482 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 CCZ1P86791 482 aaPredicted RBP13.25□□□□□ -0.29
USP38-201ENST00000307017 TWF1Q12792 350 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 LRRC31Q6UY01 552 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 OR9Q1Q8NGQ5 310 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 PTPRN2Q92932 1015 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 PLEKHA5Q9HAU0 1116 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 EML4Q9HC35 981 aaKnown RBP13.25□□□□□ -0.29
USP38-201ENST00000307017 PARVAQ9NVD7 372 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 MCM8Q9UJA3 840 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 WDR19Q8NEZ3 1342 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 RRN3P2A6NIE6 340 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 POU1F1P28069 291 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 CASP4P49662 377 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 CLK1P49759 484 aaKnown RBP13.25□□□□□ -0.29
USP38-201ENST00000307017 SEMA3FQ13275 785 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 LRRN4CLQ8ND94 238 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 HASPINQ8TF76 798 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 PHF21AQ96BD5 680 aa13.25□□□□□ -0.29
USP38-201ENST00000307017 DDX18Q9NVP1 670 aaKnown RBP13.25□□□□□ -0.29
USP38-201ENST00000307017 PIN4Q9Y237 131 aaKnown RBP13.25□□□□□ -0.29
USP38-201ENST00000307017 PLEKHG1Q9ULL1 1385 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 MYL2P10916 166 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 ZRANB3Q5FWF4 1079 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 TCHHL1Q5QJ38 904 aaPredicted RBP13.24□□□□□ -0.29
USP38-201ENST00000307017 ARL10Q8N8L6 244 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 DNAJC9Q8WXX5 260 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 PRCCQ92733 491 aaPredicted RBP13.24□□□□□ -0.29
USP38-201ENST00000307017 ZC3H7BQ9UGR2 993 aaKnown RBP13.24□□□□□ -0.29
USP38-201ENST00000307017 AGO2Q9UKV8 859 aaKnown RBP13.24□□□□□ -0.29
USP38-201ENST00000307017 RARBP10826 455 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 LTKP29376 864 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 YWHABP31946 246 aaKnown RBP13.24□□□□□ -0.29
USP38-201ENST00000307017 SLC30A9Q6PML9 568 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 RAD9BQ6WBX8 426 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 DGKHQ86XP1 1220 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 REXO1L1PQ8IX06 675 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 ZNF614Q8N883 585 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 PIGBQ92521 554 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 TEX13BQ9BXU2 312 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 MRPL1Q9BYD6 325 aaKnown RBP13.24□□□□□ -0.29
USP38-201ENST00000307017 CCDC188H7C350 402 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 DPYSL4O14531 572 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 SRP72O76094 671 aaKnown RBP13.24□□□□□ -0.29
USP38-201ENST00000307017 ITGB6P18564 788 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 PLA2G4AP47712 749 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 CSNK2BP67870 215 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 LAMC2Q13753 1193 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 EZH2Q15910 746 aaKnown RBP13.24□□□□□ -0.29
USP38-201ENST00000307017 BTBD8Q5XKL5 378 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 OLFM3Q96PB7 478 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 TMEM237Q96Q45 408 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 WNT8AQ9H1J5 351 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 KCTD10Q9H3F6 313 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 SLC39A10Q9ULF5 831 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 TSPAN3O60637 253 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 WDR72Q3MJ13 1102 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 RHOT1Q8IXI2 618 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 FAM111AQ96PZ2 611 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 APOL2Q9BQE5 337 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 TEX12Q9BXU0 123 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 RNF19AQ9NV58 838 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 ARHGEF38Q9NXL2 777 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 USP15Q9Y4E8 981 aaPredicted RBP13.24□□□□□ -0.29
USP38-201ENST00000307017 TMCC1O94876 653 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 STOX1Q6ZVD7 989 aa13.24□□□□□ -0.29
USP38-201ENST00000307017 ARL2BPQ9Y2Y0 163 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms