RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 RPL13P26373 211 aaKnown RBP11.58□□□□□ -0.56
LSM3-201ENST00000306024 FLT3P36888 993 aa11.58□□□□□ -0.56
LSM3-201ENST00000306024 SH3BGRP55822 239 aaPredicted RBP11.58□□□□□ -0.56
LSM3-201ENST00000306024 H2AFVQ71UI9 128 aa11.58□□□□□ -0.56
LSM3-201ENST00000306024 REPS2Q8NFH8 660 aa11.58□□□□□ -0.56
LSM3-201ENST00000306024 LRRC37BQ96QE4 947 aa11.58□□□□□ -0.56
LSM3-201ENST00000306024 C7orf25Q9BPX7 421 aa11.58□□□□□ -0.56
LSM3-201ENST00000306024 SBF1O95248 1867 aa11.58□□□□□ -0.56
LSM3-201ENST00000306024 TXNDC9O14530 226 aa11.58□□□□□ -0.56
LSM3-201ENST00000306024 DYNC1LI2O43237 492 aaPredicted RBP11.58□□□□□ -0.56
LSM3-201ENST00000306024 ABCB4P21439 1286 aa11.58□□□□□ -0.56
LSM3-201ENST00000306024 FGFR4P22455 802 aa11.58□□□□□ -0.56
LSM3-201ENST00000306024 TARSP26639 723 aaKnown RBP11.58□□□□□ -0.56
LSM3-201ENST00000306024 CACNA2D1P54289 1103 aa11.58□□□□□ -0.56
LSM3-201ENST00000306024 DMP1Q13316 513 aaPredicted RBP11.58□□□□□ -0.56
LSM3-201ENST00000306024 ARHGEF6Q15052 776 aa11.58□□□□□ -0.56
LSM3-201ENST00000306024 UAP1Q16222 522 aaPredicted RBP11.58□□□□□ -0.56
LSM3-201ENST00000306024 TTI2Q6NXR4 508 aa11.58□□□□□ -0.56
LSM3-201ENST00000306024 SDCCAG8Q86SQ7 713 aaPredicted RBP11.58□□□□□ -0.56
LSM3-201ENST00000306024 ARHGAP18Q8N392 663 aa11.58□□□□□ -0.56
LSM3-201ENST00000306024 U2AF1L4Q8WU68 220 aaKnown RBP11.58□□□□□ -0.56
LSM3-201ENST00000306024 MMADHCQ9H3L0 296 aaPredicted RBP11.58□□□□□ -0.56
LSM3-201ENST00000306024 LMNAP02545 664 aaKnown RBP11.57□□□□□ -0.56
LSM3-201ENST00000306024 ZCCHC18P0CG32 403 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 HARSP12081 509 aaKnown RBP11.57□□□□□ -0.56
LSM3-201ENST00000306024 ATP6V1C1P21283 382 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 PEX5P50542 639 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 FCGRTP55899 365 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 PPP2R5CQ13362 524 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 NAB2Q15742 525 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 AGGF1Q8N302 714 aaeCLIP11.57□□□□□ -0.56
LSM3-201ENST00000306024 DEPTORQ8TB45 409 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 STK32AQ8WU08 396 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 INPP4AQ96PE3 977 aaPredicted RBP11.57□□□□□ -0.56
LSM3-201ENST00000306024 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.57□□□□□ -0.56
LSM3-201ENST00000306024 SALL4Q9UJQ4 1053 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 ADAMTS5Q9UNA0 930 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 SSU72P8A0A1W2PR75 194 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 MAPK13O15264 365 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 ATP5HO75947 161 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 SLITRK3O94933 977 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 GSTA2P09210 222 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 RGS2P41220 211 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 PSMC4P43686 418 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 PEX3P56589 373 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 PRKCEQ02156 737 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 STK4Q13043 487 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 NAALADL2Q58DX5 795 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 FAM47CQ5HY64 1035 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 LENG9Q96B70 501 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 CENPTQ96BT3 561 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 REEP2Q9BRK0 252 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 BLOC1S4Q9NUP1 217 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 PARP2Q9UGN5 583 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 SOWAHBA6NEL2 793 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 ZBTB39O15060 712 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 PAEPP09466 180 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 RARAP10276 462 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 CYP11B2P19099 503 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 ABCD1P33897 745 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 EMC10Q5UCC4 262 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 ZNF572Q7Z3I7 529 aaPredicted RBP11.57□□□□□ -0.56
LSM3-201ENST00000306024 PDCD7Q8N8D1 485 aaKnown RBP11.57□□□□□ -0.56
LSM3-201ENST00000306024 HAUS1Q96CS2 278 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 MRRFQ96E11 262 aaKnown RBP11.57□□□□□ -0.56
LSM3-201ENST00000306024 MS4A4AQ96JQ5 239 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 HAO1Q9UJM8 370 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 PTPN22Q9Y2R2 807 aa11.57□□□□□ -0.56
LSM3-201ENST00000306024 TMEM120BA0PK00 339 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 CALUO43852 315 aaPredicted RBP11.56□□□□□ -0.56
LSM3-201ENST00000306024 NPTXRO95502 500 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 GH1P01241 217 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 TGFB3P10600 412 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 ITGA4P13612 1032 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 BRAFP15056 766 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 SP100P23497 879 aaPredicted RBP11.56□□□□□ -0.56
LSM3-201ENST00000306024 STRN3Q13033 797 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 PPP2R5EQ16537 467 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 XKR3Q5GH77 459 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 MFSD14CQ5VZR4 134 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 ANO7Q6IWH7 933 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 ARHGEF18Q6ZSZ5 1173 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 IFNL1Q8IU54 200 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 OR6J1Q8NGC5 347 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 EPS8L3Q8TE67 593 aaKnown RBP11.56□□□□□ -0.56
LSM3-201ENST00000306024 RUNDC3BQ96NL0 473 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 CARD9Q9H257 536 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 ASIC3Q9UHC3 531 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 FOCADQ5VW36 1801 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 A0A1B0GVG6 124 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 SLC26A4O43511 780 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 HOXD10P28358 340 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 GSTT1P30711 240 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 TCF7P36402 384 aaPredicted RBP11.56□□□□□ -0.56
LSM3-201ENST00000306024 ABL2P42684 1182 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 IL9RQ01113 521 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 DCAF17Q5H9S7 520 aaPredicted RBP11.56□□□□□ -0.56
LSM3-201ENST00000306024 FIGNQ5HY92 759 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 ZFYVE27Q5T4F4 411 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 MEI1Q5TIA1 1274 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms