RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 KRT10P13645 584 aa14.03□□□□□ -0.16
DDX54-201ENST00000306014 CDH6P55285 790 aa14.03□□□□□ -0.16
DDX54-201ENST00000306014 C1orf228Q6PIY5 440 aa14.03□□□□□ -0.16
DDX54-201ENST00000306014 IRF2BP2Q7Z5L9 587 aa14.03□□□□□ -0.16
DDX54-201ENST00000306014 CCDC125Q86Z20 511 aa14.03□□□□□ -0.16
DDX54-201ENST00000306014 TAS1R2Q8TE23 839 aa14.03□□□□□ -0.16
DDX54-201ENST00000306014 TATDN2Q93075 761 aa14.03□□□□□ -0.16
DDX54-201ENST00000306014 MED10Q9BTT4 135 aa14.03□□□□□ -0.16
DDX54-201ENST00000306014 SLC38A10Q9HBR0 1119 aa14.03□□□□□ -0.16
DDX54-201ENST00000306014 PHTF1Q9UMS5 762 aa14.03□□□□□ -0.16
DDX54-201ENST00000306014 CHMP2BQ9UQN3 213 aa14.03□□□□□ -0.16
DDX54-201ENST00000306014 ASAP2O43150 1006 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 TRPA1O75762 1119 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 TTC4O95801 387 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 RARAP10276 462 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 SMTNL2Q2TAL5 461 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 MMEL1Q495T6 779 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 EIF1ADQ8N9N8 165 aaKnown RBP14.02□□□□□ -0.16
DDX54-201ENST00000306014 CCDC124Q96CT7 223 aaKnown RBP14.02□□□□□ -0.16
DDX54-201ENST00000306014 IVNS1ABPQ9Y6Y0 642 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 FLT3P36888 993 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 CENPCQ03188 943 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 DBN1Q16643 649 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 ZNF568Q3ZCX4 644 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 FAM102AQ5T9C2 384 aaPredicted RBP14.02□□□□□ -0.16
DDX54-201ENST00000306014 YTHDF3Q7Z739 585 aaKnown RBP14.02□□□□□ -0.16
DDX54-201ENST00000306014 ARHGEF19Q8IW93 802 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 ZKSCAN4Q969J2 545 aaPredicted RBP14.02□□□□□ -0.16
DDX54-201ENST00000306014 CYP4F11Q9HBI6 524 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 ASNSD1Q9NWL6 643 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 WHRNQ9P202 907 aa14.02□□□□□ -0.16
DDX54-201ENST00000306014 ZNF142P52746 1687 aaPredicted RBP14.02□□□□□ -0.17
DDX54-201ENST00000306014 RASSF10A6NK89 507 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 DGAT1O75907 488 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 SLURP2P0DP57 97 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 KRT4P19013 534 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 BCAR1P56945 870 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 ROR1Q01973 937 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 NCOA4Q13772 614 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 C11orf63Q6NUN7 778 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 SCFD2Q8WU76 684 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 CCT6BQ92526 530 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 SLC5A5Q92911 643 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 PGM2Q96G03 612 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 ZNF302Q9NR11 478 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 TOPORSQ9NS56 1045 aaPredicted RBP14.02□□□□□ -0.17
DDX54-201ENST00000306014 CNOT7Q9UIV1 285 aaKnown RBP14.02□□□□□ -0.17
DDX54-201ENST00000306014 TBX20Q9UMR3 447 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 SCAF8Q9UPN6 1271 aaKnown RBP14.02□□□□□ -0.17
DDX54-201ENST00000306014 ZHX2Q9Y6X8 837 aa14.02□□□□□ -0.17
DDX54-201ENST00000306014 M0QYV0 167 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 CCDC22O60826 627 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 SLITRK3O94933 977 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 ENO1P06733 434 aaKnown RBP14.01□□□□□ -0.17
DDX54-201ENST00000306014 NFX1Q12986 1120 aaKnown RBP14.01□□□□□ -0.17
DDX54-201ENST00000306014 PDZD4Q76G19 769 aaPredicted RBP14.01□□□□□ -0.17
DDX54-201ENST00000306014 PIP4K2CQ8TBX8 421 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 FIS1Q9Y3D6 152 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 GHRP10912 638 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 KLC1Q07866 573 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 BAATQ14032 418 aaPredicted RBP14.01□□□□□ -0.17
DDX54-201ENST00000306014 DDX27Q96GQ7 796 aaKnown RBP14.01□□□□□ -0.17
DDX54-201ENST00000306014 TIPINQ9BVW5 301 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 ACP6Q9NPH0 428 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 NDE1Q9NXR1 346 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 NID2Q14112 1375 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 PIK3R2O00459 728 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 SHOX2O60902 331 aaPredicted RBP14.01□□□□□ -0.17
DDX54-201ENST00000306014 GPC4O75487 556 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 IL1R1P14778 569 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 LNX1Q8TBB1 728 aaPredicted RBP14.01□□□□□ -0.17
DDX54-201ENST00000306014 FOXP3Q9BZS1 431 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 KCTD10Q9H3F6 313 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 JPH1Q9HDC5 661 aaPredicted RBP14.01□□□□□ -0.17
DDX54-201ENST00000306014 NAALADL1Q9UQQ1 740 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 CST8O60676 142 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 DUOXA2Q1HG44 320 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 COBLL1Q53SF7 1204 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 RGS9BPQ6ZS82 235 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 ST13P4Q8IZP2 240 aaPredicted RBP14.01□□□□□ -0.17
DDX54-201ENST00000306014 DNAJC9Q8WXX5 260 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 VPS11Q9H270 941 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 ABCF3Q9NUQ8 709 aa14.01□□□□□ -0.17
DDX54-201ENST00000306014 MRC1P22897 1456 aa14□□□□□ -0.17
DDX54-201ENST00000306014 ENTPD3O75355 529 aa14□□□□□ -0.17
DDX54-201ENST00000306014 NOL4O94818 638 aa14□□□□□ -0.17
DDX54-201ENST00000306014 CPA2P48052 419 aa14□□□□□ -0.17
DDX54-201ENST00000306014 GPC3P51654 580 aa14□□□□□ -0.17
DDX54-201ENST00000306014 RPS6KA2Q15349 733 aa14□□□□□ -0.17
DDX54-201ENST00000306014 STXBP2Q15833 593 aa14□□□□□ -0.17
DDX54-201ENST00000306014 GABPB2Q8TAK5 448 aaPredicted RBP14□□□□□ -0.17
DDX54-201ENST00000306014 FEZF2Q8TBJ5 459 aa14□□□□□ -0.17
DDX54-201ENST00000306014 KAT5Q92993 513 aa14□□□□□ -0.17
DDX54-201ENST00000306014 MAGEB18Q96M61 343 aa14□□□□□ -0.17
DDX54-201ENST00000306014 XPO7Q9UIA9 1087 aaKnown RBP14□□□□□ -0.17
DDX54-201ENST00000306014 SSX2IPQ9Y2D8 614 aa14□□□□□ -0.17
DDX54-201ENST00000306014 TISP43B9A030 160 aa14□□□□□ -0.17
DDX54-201ENST00000306014 GMNNO75496 209 aa14□□□□□ -0.17
DDX54-201ENST00000306014 MARCKSL1P49006 195 aa14□□□□□ -0.17
DDX54-201ENST00000306014 RHBDL3P58872 404 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms