RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ZBTB39O15060 712 aa13.77□□□□□ -0.2
TRIM35-201ENST00000305364 PIAS1O75925 651 aa13.77□□□□□ -0.2
TRIM35-201ENST00000305364 GZMAP12544 262 aa13.77□□□□□ -0.2
TRIM35-201ENST00000305364 ADRA1DP25100 572 aa13.77□□□□□ -0.2
TRIM35-201ENST00000305364 ARL4CP56559 192 aa13.77□□□□□ -0.2
TRIM35-201ENST00000305364 MPP2Q14168 576 aa13.77□□□□□ -0.2
TRIM35-201ENST00000305364 DBN1Q16643 649 aa13.77□□□□□ -0.2
TRIM35-201ENST00000305364 NBPF20Q3BBV1 942 aa13.77□□□□□ -0.2
TRIM35-201ENST00000305364 DAB2IPQ5VWQ8 1189 aa13.77□□□□□ -0.2
TRIM35-201ENST00000305364 CEP70Q8NHQ1 597 aa13.77□□□□□ -0.2
TRIM35-201ENST00000305364 SUGT1Q9Y2Z0 365 aa13.77□□□□□ -0.2
TRIM35-201ENST00000305364 LRP6O75581 1613 aa13.77□□□□□ -0.2
TRIM35-201ENST00000305364 MSH4O15457 936 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 PSMG1O95456 288 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 NPTXRO95502 500 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 ALADP13716 330 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 GCLCP48506 637 aaPredicted RBP13.77□□□□□ -0.21
TRIM35-201ENST00000305364 ITPK1Q13572 414 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 CYP2W1Q8TAV3 490 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 ZNF184Q99676 751 aaPredicted RBP13.77□□□□□ -0.21
TRIM35-201ENST00000305364 TXLNGYQ9BZA5 131 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 DCLK3Q9C098 648 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 LRRC19Q9H756 370 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 STK32BQ9NY57 414 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 ARMCX1Q9P291 453 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 IQANK1A0A1B0GTG1 560 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 COPEO14579 308 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 NDC80O14777 642 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 TLR3O15455 904 aaKnown RBP13.77□□□□□ -0.21
TRIM35-201ENST00000305364 TGFB1I1O43294 461 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 RTN3O95197 1032 aaPredicted RBP13.77□□□□□ -0.21
TRIM35-201ENST00000305364 GDF11O95390 407 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 DSG1Q02413 1049 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 CCDC15Q0P6D6 951 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 SLC45A4Q5BKX6 768 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 ATP11CQ8NB49 1132 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 PIP4K2CQ8TBX8 421 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.77□□□□□ -0.21
TRIM35-201ENST00000305364 EZH1Q92800 747 aaPredicted RBP13.77□□□□□ -0.21
TRIM35-201ENST00000305364 MAK16Q9BXY0 300 aaKnown RBP13.77□□□□□ -0.21
TRIM35-201ENST00000305364 RHBDL2Q9NX52 303 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 PCDHB4Q9Y5E5 795 aa13.77□□□□□ -0.21
TRIM35-201ENST00000305364 ABLIM1O14639 778 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 SLC16A4O15374 487 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 POLR2MP0CAP2 368 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 LBRQ14739 615 aaKnown RBP13.76□□□□□ -0.21
TRIM35-201ENST00000305364 XKR9Q5GH70 373 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 KRT39Q6A163 491 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 C3orf62Q6ZUJ4 267 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 NOP9Q86U38 636 aaKnown RBP13.76□□□□□ -0.21
TRIM35-201ENST00000305364 CCNJLQ8IV13 435 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 CYP4F11Q9HBI6 524 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 OLFML3Q9NRN5 406 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 MTO1Q9Y2Z2 717 aaKnown RBP13.76□□□□□ -0.21
TRIM35-201ENST00000305364 TBX3O15119 743 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 EDF1O60869 148 aaKnown RBP13.76□□□□□ -0.21
TRIM35-201ENST00000305364 KRT10P13645 584 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 CCNB1P14635 433 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 POLD1P28340 1107 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 ALDH18A1P54886 795 aaKnown RBP13.76□□□□□ -0.21
TRIM35-201ENST00000305364 OLFML2BQ68BL8 750 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 OPTNQ96CV9 577 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 CCDC17Q96LX7 622 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 WDR11Q9BZH6 1224 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 HSPBP1Q9NZL4 362 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 LRRC42Q9Y546 428 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 PCDHA2Q9Y5H9 948 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 PRELPP51888 382 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 BPIFB4P59827 614 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 ACVR2BQ13705 512 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 KIF22Q14807 665 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 AOC3Q16853 763 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 KLHL38Q2WGJ6 581 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 ZNF720Q7Z2F6 126 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 SLC25A41Q8N5S1 370 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 LXNQ9BS40 222 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 KIAA1586Q9HCI6 787 aa13.76□□□□□ -0.21
TRIM35-201ENST00000305364 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.75□□□□□ -0.21
TRIM35-201ENST00000305364 HNRNPDLO14979 420 aaKnown RBP13.75□□□□□ -0.21
TRIM35-201ENST00000305364 TRPA1O75762 1119 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 MYL2P10916 166 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 CYP11B1P15538 503 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 WDR4P57081 412 aaKnown RBP13.75□□□□□ -0.21
TRIM35-201ENST00000305364 DLG4P78352 724 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 CENPCQ03188 943 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 PTK6Q13882 451 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 NFIXQ14938 502 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 PDK4Q16654 411 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 BRDTQ58F21 947 aaPredicted RBP13.75□□□□□ -0.21
TRIM35-201ENST00000305364 SYCP2LQ5T4T6 812 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 RFWD3Q6PCD5 774 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 C4orf50Q6ZRC1 276 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 OTOAQ7RTW8 1153 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 CBWD1Q9BRT8 395 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 TMEM120AQ9BXJ8 343 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 SLC13A1Q9BZW2 595 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 QTRT2Q9H974 415 aaKnown RBP13.75□□□□□ -0.21
TRIM35-201ENST00000305364 SAR1AQ9NR31 198 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 TOM1L1O75674 476 aa13.75□□□□□ -0.21
TRIM35-201ENST00000305364 APBA3O96018 575 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms