RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.25■■■□□ 2.276e-10■■■■■ 98.2
HDAC3-201ENST00000305264 GCNT4Q9P109 453 aa29.25■■■□□ 2.27
HDAC3-201ENST00000305264 F8W810 466 aa29.24■■■□□ 2.27
HDAC3-201ENST00000305264 PODXLO00592 558 aa29.24■■■□□ 2.27
HDAC3-201ENST00000305264 P4HA2O15460 535 aa29.24■■■□□ 2.27
HDAC3-201ENST00000305264 UPP1Q16831 310 aa29.24■■■□□ 2.27
HDAC3-201ENST00000305264 C3orf58Q8NDZ4 430 aa29.24■■■□□ 2.27
HDAC3-201ENST00000305264 SP7Q8TDD2 431 aaPredicted RBP29.24■■■□□ 2.27
HDAC3-201ENST00000305264 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.24■■■□□ 2.27
HDAC3-201ENST00000305264 PIRO00625 290 aa29.24■■■□□ 2.27
HDAC3-201ENST00000305264 MYOGP15173 224 aa29.24■■■□□ 2.27
HDAC3-201ENST00000305264 MYL6P60660 151 aa29.24■■■□□ 2.27
HDAC3-201ENST00000305264 TRPC3Q13507 836 aa29.24■■■□□ 2.27
HDAC3-201ENST00000305264 FKBP15Q5T1M5 1219 aa29.24■■■□□ 2.27
HDAC3-201ENST00000305264 PI4K2AQ9BTU6 479 aa29.24■■■□□ 2.27
HDAC3-201ENST00000305264 OR1G1P47890 313 aa29.23■■■□□ 2.27
HDAC3-201ENST00000305264 SLC11A1P49279 550 aa29.23■■■□□ 2.27
HDAC3-201ENST00000305264 RBP5P82980 135 aa29.23■■■□□ 2.27
HDAC3-201ENST00000305264 NR1I3Q14994 352 aa29.23■■■□□ 2.27
HDAC3-201ENST00000305264 UROC1Q96N76 676 aa29.23■■■□□ 2.27
HDAC3-201ENST00000305264 GRPEL1Q9HAV7 217 aa29.23■■■□□ 2.27
HDAC3-201ENST00000305264 RAB20Q9NX57 234 aa29.23■■■□□ 2.27
HDAC3-201ENST00000305264 PRG3Q9Y2Y8 225 aaPredicted RBP29.23■■■□□ 2.27
HDAC3-201ENST00000305264 GTPBP10A4D1E9 387 aaKnown RBP29.22■■■□□ 2.27
HDAC3-201ENST00000305264 RPL9P32969 192 aaKnown RBP29.22■■■□□ 2.27
HDAC3-201ENST00000305264 GSE1Q14687 1217 aa29.22■■■□□ 2.27
HDAC3-201ENST00000305264 LMO3Q8TAP4 145 aa29.22■■■□□ 2.27
HDAC3-201ENST00000305264 XYLT2Q9H1B5 865 aa29.22■■■□□ 2.27
HDAC3-201ENST00000305264 CETN1Q12798 172 aa29.22■■■□□ 2.27
HDAC3-201ENST00000305264 SPOUT1Q5T280 376 aaKnown RBP29.22■■■□□ 2.27
HDAC3-201ENST00000305264 GBP6Q6ZN66 633 aa29.22■■■□□ 2.27
HDAC3-201ENST00000305264 FIBCD1Q8N539 461 aa29.22■■■□□ 2.27
HDAC3-201ENST00000305264 CHD9Q3L8U1 2897 aa29.22■■■□□ 2.27
HDAC3-201ENST00000305264 KIF4AO95239 1232 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 ITGB1P05556 798 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 LINC00271P0C7V0 271 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 BCAR1P56945 870 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 KCNMA1Q12791 1236 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 EXOC3L4Q17RC7 722 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 HASPINQ8TF76 798 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 DDX27Q96GQ7 796 aaKnown RBP29.21■■■□□ 2.27
HDAC3-201ENST00000305264 TMEM175Q9BSA9 504 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 INTS2Q9H0H0 1204 aaKnown RBP29.21■■■□□ 2.27
HDAC3-201ENST00000305264 NLRC5Q86WI3 1866 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 NRP1O14786 923 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 GALTP07902 379 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 SLC9A1P19634 815 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 KLK7P49862 253 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 APBA1Q02410 837 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 SPOPLQ6IQ16 392 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 LRRC52Q8N7C0 313 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 TRIM5Q9C035 493 aa29.21■■■□□ 2.27
HDAC3-201ENST00000305264 NT5C1B-RDH14C9J2C7 533 aa29.2■■■□□ 2.26
HDAC3-201ENST00000305264 ASS1P00966 412 aaKnown RBP29.2■■■□□ 2.26
HDAC3-201ENST00000305264 SYCP1Q15431 976 aa29.2■■■□□ 2.26
HDAC3-201ENST00000305264 TMEM173Q86WV6 379 aaPredicted RBP29.2■■■□□ 2.26
HDAC3-201ENST00000305264 HPDLQ96IR7 371 aa29.2■■■□□ 2.26
HDAC3-201ENST00000305264 R3HCC1Q9Y3T6 440 aaKnown RBP29.2■■■□□ 2.26
HDAC3-201ENST00000305264 SPTLC1O15269 473 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 B3GAT3O94766 335 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 CLSTN1O94985 981 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 ARHGEF15O94989 841 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 PON1P27169 355 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 PBX2P40425 430 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 ZNF699Q32M78 642 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 TRIM65Q6PJ69 517 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 CD300LGQ6UXG3 332 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 EHBP1Q8NDI1 1231 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 ZNF560Q96MR9 790 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 ERGIC2Q96RQ1 377 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 APOBEC3GQ9HC16 384 aaKnown RBP29.19■■■□□ 2.26
HDAC3-201ENST00000305264 MARCH5Q9NX47 278 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 SIK3Q9Y2K2 1263 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 CBFA2T2O43439 604 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 NOP14P78316 857 aaKnown RBP29.19■■■□□ 2.26
HDAC3-201ENST00000305264 FAN1Q9Y2M0 1017 aa29.19■■■□□ 2.26
HDAC3-201ENST00000305264 YBX2Q9Y2T7 364 aaKnown RBP29.19■■■□□ 2.26
HDAC3-201ENST00000305264 CHD7Q9P2D1 2997 aa29.18■■■□□ 2.26
HDAC3-201ENST00000305264 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.18■■■□□ 2.26
HDAC3-201ENST00000305264 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.18■■■□□ 2.26
HDAC3-201ENST00000305264 ALDH2P05091 517 aa29.18■■■□□ 2.26
HDAC3-201ENST00000305264 TAF6P49848 677 aa29.18■■■□□ 2.26
HDAC3-201ENST00000305264 LILRA4P59901 499 aa29.18■■■□□ 2.26
HDAC3-201ENST00000305264 LRMPQ12912 555 aa29.18■■■□□ 2.26
HDAC3-201ENST00000305264 SGSM1Q2NKQ1 1148 aa29.18■■■□□ 2.26
HDAC3-201ENST00000305264 DCLRE1AQ6PJP8 1040 aa29.18■■■□□ 2.26
HDAC3-201ENST00000305264 KCNT2Q6UVM3 1135 aa29.18■■■□□ 2.26
HDAC3-201ENST00000305264 COLGALT1Q8NBJ5 622 aa29.18■■■□□ 2.26
HDAC3-201ENST00000305264 BCL7CQ8WUZ0 217 aaPredicted RBP29.18■■■□□ 2.26
HDAC3-201ENST00000305264 CLP1Q92989 425 aaKnown RBP29.18■■■□□ 2.26
HDAC3-201ENST00000305264 PBX4Q9BYU1 374 aa29.18■■■□□ 2.26
HDAC3-201ENST00000305264 IMPG2Q9BZV3 1241 aa29.18■■■□□ 2.26
HDAC3-201ENST00000305264 PCDHA11Q9Y5I1 949 aa29.18■■■□□ 2.26
HDAC3-201ENST00000305264 LINC01553A4QN01 128 aa29.17■■■□□ 2.26
HDAC3-201ENST00000305264 CA3P07451 260 aa29.17■■■□□ 2.26
HDAC3-201ENST00000305264 LAG3P18627 525 aa29.17■■■□□ 2.26
HDAC3-201ENST00000305264 ATICP31939 592 aa29.17■■■□□ 2.26
HDAC3-201ENST00000305264 ALDH7A1P49419 539 aaKnown RBP29.17■■■□□ 2.26
HDAC3-201ENST00000305264 MYO1EQ12965 1108 aa29.17■■■□□ 2.26
HDAC3-201ENST00000305264 NUB1Q9Y5A7 615 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms