RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 FAM111AQ96PZ2 611 aa12.96□□□□□ -0.33
ABCA3-201ENST00000301732 IRAK1P51617 712 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 PLA2G4FQ68DD2 849 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 PTPRN2Q92932 1015 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 DCUN1D5Q9BTE7 237 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 SENP2Q9HC62 589 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 ZNF302Q9NR11 478 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 MIF4GDA9UHW6 222 aaKnown RBP12.96□□□□□ -0.34
ABCA3-201ENST00000301732 UBE2Q2LH0YL09 131 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 SERPINB1P30740 379 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 INPP5AQ14642 412 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 EZH2Q15910 746 aaKnown RBP12.96□□□□□ -0.34
ABCA3-201ENST00000301732 TRIM16LQ309B1 348 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 SLC44A4Q53GD3 710 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 TTC33Q6PID6 262 aaPredicted RBP12.96□□□□□ -0.34
ABCA3-201ENST00000301732 BARGINQ6ZT62 677 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 THEM5Q8N1Q8 247 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 HES6Q96HZ4 224 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 MXD3Q9BW11 206 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 CYLDQ9NQC7 956 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 HERC5Q9UII4 1024 aaKnown RBP12.96□□□□□ -0.34
ABCA3-201ENST00000301732 APPL1Q9UKG1 709 aa12.96□□□□□ -0.34
ABCA3-201ENST00000301732 WDR19Q8NEZ3 1342 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 TSPAN3O60637 253 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 ARID3BQ8IVW6 561 aaPredicted RBP12.95□□□□□ -0.34
ABCA3-201ENST00000301732 REXO1L1PQ8IX06 675 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 RNF148Q8N7C7 305 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 JADE3Q92613 823 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 MAGED4Q96JG8 741 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 SLC39A10Q9ULF5 831 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 TMCC1O94876 653 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 CALB1P05937 261 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 TRIM69Q86WT6 500 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 CENPTQ96BT3 561 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 CCDC17Q96LX7 622 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 PDE5AO76074 875 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 TPI1P60174 286 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 DGKHQ86XP1 1220 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 WNT8AQ9H1J5 351 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.95□□□□□ -0.34
ABCA3-201ENST00000301732 ZBTB5O15062 677 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 SRP72O76094 671 aaKnown RBP12.95□□□□□ -0.34
ABCA3-201ENST00000301732 RARBP10826 455 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 DDX5P17844 614 aaKnown RBP12.95□□□□□ -0.34
ABCA3-201ENST00000301732 PLEKHA7Q6IQ23 1121 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 OTOAQ7RTW8 1153 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 STAMBPL1Q96FJ0 436 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 OSBPL5Q9H0X9 879 aaPredicted RBP12.95□□□□□ -0.34
ABCA3-201ENST00000301732 PPARGP37231 505 aaPredicted RBP12.95□□□□□ -0.34
ABCA3-201ENST00000301732 SERPINB10P48595 397 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 TEDDM1Q5T9Z0 273 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 CCNI2Q6ZMN8 369 aaPredicted RBP12.95□□□□□ -0.34
ABCA3-201ENST00000301732 CHMP1BQ7LBR1 199 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 RNF149Q8NC42 400 aa12.95□□□□□ -0.34
ABCA3-201ENST00000301732 CIITAP33076 1130 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.94□□□□□ -0.34
ABCA3-201ENST00000301732 CIAO1O76071 339 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 ATP12AP54707 1039 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 KCNT1Q5JUK3 1230 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 OMA1Q96E52 524 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 OSBPL3Q9H4L5 887 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 PARVAQ9NVD7 372 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 FAM32AQ9Y421 112 aaKnown RBP12.94□□□□□ -0.34
ABCA3-201ENST00000301732 SNX13Q9Y5W8 968 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 SNX9Q9Y5X1 595 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 MYO1DO94832 1006 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 FGFR2P21802 821 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 RFFLQ8WZ73 363 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 AGO2Q9UKV8 859 aaKnown RBP12.94□□□□□ -0.34
ABCA3-201ENST00000301732 ZMYM3Q14202 1370 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.94□□□□□ -0.34
ABCA3-201ENST00000301732 MYL2P10916 166 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 COMTP21964 271 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 PAX7P23759 505 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 PLA2G4AP47712 749 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 ZNF200P98182 395 aaPredicted RBP12.94□□□□□ -0.34
ABCA3-201ENST00000301732 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.94□□□□□ -0.34
ABCA3-201ENST00000301732 C18orf8Q96DM3 657 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 APOL2Q9BQE5 337 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 ARHGEF38Q9NXL2 777 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 SOX13Q9UN79 622 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 CDYLQ9Y232 598 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 GNAT1P11488 350 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 TWF1Q12792 350 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 BTBD8Q5XKL5 378 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 STOX1Q6ZVD7 989 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 ZNF614Q8N883 585 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 TTC13Q8NBP0 860 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 SPATA33Q96N06 139 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 WRNIP1Q96S55 665 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 CCSER1Q9C0I3 900 aa12.94□□□□□ -0.34
ABCA3-201ENST00000301732 RANBP17Q9H2T7 1088 aaKnown RBP12.94□□□□□ -0.34
ABCA3-201ENST00000301732 EML4Q9HC35 981 aaKnown RBP12.94□□□□□ -0.34
ABCA3-201ENST00000301732 STRNO43815 780 aa12.93□□□□□ -0.34
ABCA3-201ENST00000301732 SLFN12LQ6IEE8 588 aa12.93□□□□□ -0.34
ABCA3-201ENST00000301732 CYB5D1Q6P9G0 228 aa12.93□□□□□ -0.34
ABCA3-201ENST00000301732 SRBD1Q8N5C6 995 aaKnown RBP12.93□□□□□ -0.34
ABCA3-201ENST00000301732 KCTD10Q9H3F6 313 aa12.93□□□□□ -0.34
ABCA3-201ENST00000301732 PLEKHA5Q9HAU0 1116 aa12.93□□□□□ -0.34
ABCA3-201ENST00000301732 HEY2Q9UBP5 337 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms