RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 TYROBPO43914 113 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 GZMAP12544 262 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 WDR72Q3MJ13 1102 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 SLC10A5Q5PT55 438 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 HP1BP3Q5SSJ5 553 aaPredicted RBP11.54□□□□□ -0.56
ZNF558-201ENST00000301475 CLEC4GQ6UXB4 293 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 FAM196AQ6ZSG2 479 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 CAPN12Q6ZSI9 719 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 FAM81AQ8TBF8 368 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 BTBD10Q9BSF8 475 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 HEMGNQ9BXL5 484 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 SUGT1Q9Y2Z0 365 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 CFAP69A5D8W1 941 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 MSH4O15457 936 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 TAL1P17542 331 aaPredicted RBP11.54□□□□□ -0.56
ZNF558-201ENST00000301475 KRT15P19012 456 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 AP1B1Q10567 949 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 PCNX4Q63HM2 1172 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 LVRNQ6Q4G3 990 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 MOXD1Q6UVY6 613 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 C1orf186Q6ZWK4 172 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 ZNF720Q7Z2F6 126 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 MRRFQ96E11 262 aaKnown RBP11.54□□□□□ -0.56
ZNF558-201ENST00000301475 ZNF184Q99676 751 aaPredicted RBP11.54□□□□□ -0.56
ZNF558-201ENST00000301475 PARVGQ9HBI0 331 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 STX18Q9P2W9 335 aaKnown RBP11.54□□□□□ -0.56
ZNF558-201ENST00000301475 PCDHA1Q9Y5I3 950 aa11.54□□□□□ -0.56
ZNF558-201ENST00000301475 COL24A1Q17RW2 1714 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 CCDC22O60826 627 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 ZCCHC18P0CG32 403 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 PYGBP11216 843 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 GCLMP48507 274 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 SLC18A1P54219 525 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 EPC2Q52LR7 807 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 NBPF5PQ86XG9 351 aaPredicted RBP11.53□□□□□ -0.56
ZNF558-201ENST00000301475 CFAP61Q8NHU2 1237 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 GRK7Q8WTQ7 553 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 KREMEN1Q96MU8 473 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 FAM210AQ96ND0 272 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 GBP5Q96PP8 586 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 SMC6Q96SB8 1091 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 MAK16Q9BXY0 300 aaKnown RBP11.53□□□□□ -0.56
ZNF558-201ENST00000301475 C12orf65Q9H3J6 166 aaKnown RBP11.53□□□□□ -0.56
ZNF558-201ENST00000301475 SAYSD1Q9NPB0 183 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 FBXO6Q9NRD1 293 aaPredicted RBP11.53□□□□□ -0.56
ZNF558-201ENST00000301475 SMG5Q9UPR3 1016 aaKnown RBP11.53□□□□□ -0.56
ZNF558-201ENST00000301475 WDR91A4D1P6 747 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 HAUS5O94927 633 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 ADRA1DP25100 572 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 ADSSP30520 456 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 MAN1A1P33908 653 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 GABPAQ06546 454 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 CNPY1Q3B7I2 92 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 C1orf220Q5T0J3 134 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 HHATQ5VTY9 493 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 RINLQ6ZS11 566 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 FAM178BQ8IXR5 827 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 GLIS1Q8NBF1 620 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 ARHGEF1Q92888 912 aaKnown RBP11.53□□□□□ -0.56
ZNF558-201ENST00000301475 SETDB2Q96T68 719 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 DMAP1Q9NPF5 467 aaPredicted RBP11.53□□□□□ -0.56
ZNF558-201ENST00000301475 UVRAGQ9P2Y5 699 aa11.53□□□□□ -0.56
ZNF558-201ENST00000301475 A0A0G2JND7 137 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 TBX3O15119 743 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 LYNP07948 512 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 SLURP2P0DP57 97 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 AMPD1P23109 780 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 NR1H3Q13133 447 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 KLF1Q13351 362 aaPredicted RBP11.52□□□□□ -0.56
ZNF558-201ENST00000301475 DYNC1I2Q13409 638 aaKnown RBP11.52□□□□□ -0.56
ZNF558-201ENST00000301475 NFIXQ14938 502 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 Q4G0T1 1027 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 TDRPQ86YL5 185 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 FAM71AQ8IYT1 594 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 ZNF276Q8N554 614 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 ZCCHC9Q8N567 271 aaKnown RBP11.52□□□□□ -0.56
ZNF558-201ENST00000301475 ZSWIM2Q8NEG5 633 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 NDNQ99608 321 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 FAM192AQ9GZU8 254 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 PCIF1Q9H4Z3 704 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 SYNCQ9H7C4 482 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 PDP2Q9P2J9 529 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 ANAPC7Q9UJX3 599 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 FOCADQ5VW36 1801 aa11.52□□□□□ -0.56
ZNF558-201ENST00000301475 GYG2O15488 501 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 HNRNPCL1O60812 293 aaKnown RBP11.52□□□□□ -0.57
ZNF558-201ENST00000301475 SPATA31D3P0C874 917 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 RALAP11233 206 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 ADRA2BP18089 450 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 TM4SF1P30408 202 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 ERFP50548 548 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 MCL1Q07820 350 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 USP4Q13107 963 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 PICALMQ13492 652 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 RASA3Q14644 834 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 P3H1Q32P28 736 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 FYB2Q5VWT5 728 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 LLGL2Q6P1M3 1020 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 SPATA31D4Q6ZUB0 917 aa11.52□□□□□ -0.57
ZNF558-201ENST00000301475 RFX8Q6ZV50 586 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms