RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 DICER1Q9UPY3 1922 aaKnown RBP15.55■□□□□ 0.08
SMG8-201ENST00000300917 MYO1FO00160 1098 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 PIGRP01833 764 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 CYP4A22Q5TCH4 519 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 TAPT1Q6NXT6 567 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 TTC27Q6P3X3 843 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 CCDC105Q8IYK2 499 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 C1orf131Q8NDD1 294 aaKnown RBP15.55■□□□□ 0.08
SMG8-201ENST00000300917 CCDC113Q9H0I3 377 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 PNMA3Q9UL41 463 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 ASB14A6NK59 587 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 CCDC188H7C350 402 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 HBP1O60381 514 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 LGR5O75473 907 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 NFICP08651 508 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 ECHS1P30084 290 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 PEX5P50542 639 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 DUOXA2Q1HG44 320 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 ZNF699Q32M78 642 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 WDR72Q3MJ13 1102 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 C11orf63Q6NUN7 778 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 PLPPR4Q7Z2D5 763 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 PRELID2Q8N945 189 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 CALR3Q96L12 384 aaKnown RBP15.55■□□□□ 0.08
SMG8-201ENST00000300917 CDT1Q9H211 546 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 PLAAQ9Y263 795 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 ATP8A1Q9Y2Q0 1164 aa15.55■□□□□ 0.08
SMG8-201ENST00000300917 MROH7Q68CQ1 1323 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 PI4K2BG5E9Z4 385 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 PIK3R2O00459 728 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 CES2O00748 559 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 AARSP49588 968 aaKnown RBP eCLIP15.54■□□□□ 0.08
SMG8-201ENST00000300917 RPL7AP62424 266 aaKnown RBP15.54■□□□□ 0.08
SMG8-201ENST00000300917 ATP13A4Q4VNC1 1196 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 CEP85LQ5SZL2 805 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 ZPBP2Q6X784 338 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 ENOSF1Q7L5Y1 443 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 ZNF606Q8WXB4 792 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 MS4A4AQ96JQ5 239 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 CISHQ9NSE2 258 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 DAAM1Q9Y4D1 1078 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 SMIM23A6NLE4 172 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 FAM189A1O60320 539 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 CLDN10P78369 228 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 CCNA1P78396 465 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 TTMPQ5BVD1 217 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 KCNV1Q6PIU1 500 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 MPZL3Q6UWV2 235 aa15.54■□□□□ 0.08
SMG8-201ENST00000300917 DNAJC17Q9NVM6 304 aaKnown RBP15.54■□□□□ 0.08
SMG8-201ENST00000300917 IQCA1LA6NCM1 817 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 GOLGA8SH3BPF8 625 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 ZC3H11AO75152 810 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMG8-201ENST00000300917 C22orf31O95567 290 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 RARAP10276 462 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 TCF4P15884 667 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 DHX9Q08211 1270 aaKnown RBP15.53■□□□□ 0.08
SMG8-201ENST00000300917 KIZQ2M2Z5 673 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 HERPUD2Q9BSE4 406 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 TJP2Q9UDY2 1190 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 CPSF3Q9UKF6 684 aaKnown RBP15.53■□□□□ 0.08
SMG8-201ENST00000300917 ACKR2O00590 384 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 RWDD2BP57060 319 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 MBTD1Q05BQ5 628 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 TFDP1Q14186 410 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 CCDC137Q6PK04 289 aaKnown RBP15.53■□□□□ 0.08
SMG8-201ENST00000300917 JAMLQ86YT9 394 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 ABRAQ8N0Z2 381 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 CAVIN3Q969G5 261 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 PTPN18Q99952 460 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 RRAGCQ9HB90 399 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 LRRC4CQ9HCJ2 640 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 SETD4Q9NVD3 440 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 MIF4GDA9UHW6 222 aaKnown RBP15.53■□□□□ 0.08
SMG8-201ENST00000300917 H3BRB1 525 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 SNAI1O95863 264 aaPredicted RBP15.53■□□□□ 0.08
SMG8-201ENST00000300917 ASS1P00966 412 aaKnown RBP15.53■□□□□ 0.08
SMG8-201ENST00000300917 GH1P01241 217 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 HOXC6P09630 235 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 CETPP11597 493 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 HPDP32754 393 aaPredicted RBP15.53■□□□□ 0.08
SMG8-201ENST00000300917 PTENP60484 403 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 NOMO3P69849 1222 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 GRM1Q13255 1194 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 FAM182AQ5T1J6 154 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 KAZNQ674X7 775 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 GPR142Q7Z601 462 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 CCDC25Q86WR0 208 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 TFAP2BQ92481 460 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 RNF25Q96BH1 459 aaPredicted RBP15.53■□□□□ 0.08
SMG8-201ENST00000300917 TUT1Q9H6E5 874 aaKnown RBP15.53■□□□□ 0.08
SMG8-201ENST00000300917 RPF1Q9H9Y2 349 aaKnown RBP15.53■□□□□ 0.08
SMG8-201ENST00000300917 IFT122Q9HBG6 1241 aa15.53■□□□□ 0.08
SMG8-201ENST00000300917 IGKV6-21A0A0C4DH24 114 aa15.52■□□□□ 0.08
SMG8-201ENST00000300917 ABLIM1O14639 778 aa15.52■□□□□ 0.08
SMG8-201ENST00000300917 TLR3O15455 904 aaKnown RBP15.52■□□□□ 0.08
SMG8-201ENST00000300917 DYNC1LI2O43237 492 aaPredicted RBP15.52■□□□□ 0.08
SMG8-201ENST00000300917 ADCY6O43306 1168 aa15.52■□□□□ 0.08
SMG8-201ENST00000300917 ITGB3P05106 788 aa15.52■□□□□ 0.08
SMG8-201ENST00000300917 HSD17B3P37058 310 aa15.52■□□□□ 0.08
SMG8-201ENST00000300917 ZNF792Q3KQV3 632 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms