RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 LMCD1Q9NZU5 365 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 RPL26L1Q9UNX3 145 aaKnown RBP13.8□□□□□ -0.2
TVP23A-201ENST00000299866 CYP3A7-CYP3A51PA0A087WV96 503 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 MTA2O94776 668 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 CYP1A2P05177 515 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 CYP3A7P24462 503 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 HOXA13P31271 388 aaPredicted RBP13.8□□□□□ -0.2
TVP23A-201ENST00000299866 FMO1Q01740 532 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 AP1B1Q10567 949 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 RASA3Q14644 834 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 ZC3H12AQ5D1E8 599 aaKnown RBP13.8□□□□□ -0.2
TVP23A-201ENST00000299866 SYDE1Q6ZW31 735 aaPredicted RBP13.8□□□□□ -0.2
TVP23A-201ENST00000299866 ZNF184Q99676 751 aaPredicted RBP13.8□□□□□ -0.2
TVP23A-201ENST00000299866 TIPINQ9BVW5 301 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 KCNQ5Q9NR82 932 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 KRT82Q9NSB4 513 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 KANSL3Q9P2N6 904 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 ANKFY1Q9P2R3 1169 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 NOCTQ9UK39 431 aaKnown RBP13.8□□□□□ -0.2
TVP23A-201ENST00000299866 GTF3C4Q9UKN8 822 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 SMG5Q9UPR3 1016 aaKnown RBP13.8□□□□□ -0.2
TVP23A-201ENST00000299866 MEIS2O14770 477 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 PRPF4O43172 522 aaKnown RBP eCLIP13.8□□□□□ -0.2
TVP23A-201ENST00000299866 ZWINTO95229 277 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 ZSCAN5DPP0CG00 497 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 PYGBP11216 843 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 ESRRAP11474 423 aaPredicted RBP13.8□□□□□ -0.2
TVP23A-201ENST00000299866 SERPINB3P29508 390 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 CNPY1Q3B7I2 92 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 WDR72Q3MJ13 1102 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 CCDC89Q8N998 374 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 CYTH2Q99418 400 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 PDP2Q9P2J9 529 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 NEU2Q9Y3R4 380 aa13.8□□□□□ -0.2
TVP23A-201ENST00000299866 SLC26A4O43511 780 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 BAG2O95816 211 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 LYNP07948 512 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 GZMAP12544 262 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 AMPD1P23109 780 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 MAN1A1P33908 653 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 NOVP48745 357 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 VAMP7P51809 220 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 RHBDL3P58872 404 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 TCEAL1Q15170 157 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 TBC1D10BQ4KMP7 808 aaPredicted RBP13.79□□□□□ -0.2
TVP23A-201ENST00000299866 ZFYVE27Q5T4F4 411 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 RIBC1Q8N443 379 aaPredicted RBP13.79□□□□□ -0.2
TVP23A-201ENST00000299866 ZSWIM2Q8NEG5 633 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 LENG9Q96B70 501 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 DMAC2Q9NW81 257 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 CYP1A1P04798 512 aaPredicted RBP13.79□□□□□ -0.2
TVP23A-201ENST00000299866 NOP14P78316 857 aaKnown RBP13.79□□□□□ -0.2
TVP23A-201ENST00000299866 NR1H3Q13133 447 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 PPP2R5CQ13362 524 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 NFIXQ14938 502 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 RGS9BPQ6ZS82 235 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 C1orf186Q6ZWK4 172 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 LRRC6Q86X45 466 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 PTPRN2Q92932 1015 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 FAM161BQ96MY7 647 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 TUBGCP5Q96RT8 1024 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
TVP23A-201ENST00000299866 CYLDQ9NQC7 956 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 TAS2R1Q9NYW7 299 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 SH3BP1Q9Y3L3 701 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 CREB3O43889 395 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 BANF1O75531 89 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 PGM1P36871 562 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 ARFIP2P53365 341 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 GPATCH4Q5T3I0 446 aaKnown RBP13.79□□□□□ -0.2
TVP23A-201ENST00000299866 IZUMO2Q6UXV1 221 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 GLIS1Q8NBF1 620 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 ARMCX1Q9P291 453 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 STX18Q9P2W9 335 aaKnown RBP13.79□□□□□ -0.2
TVP23A-201ENST00000299866 UVRAGQ9P2Y5 699 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 USTQ9Y2C2 406 aa13.79□□□□□ -0.2
TVP23A-201ENST00000299866 GOLGA8SH3BPF8 625 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 GOLGA8MH3BSY2 632 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 ETS1P14921 441 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 MTM1Q13496 603 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 KAZNQ674X7 775 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 CLEC4GQ6UXB4 293 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 TTC7BQ86TV6 843 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 ANKMY2Q8IV38 441 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 KREMEN1Q96MU8 473 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 MBOAT7Q96N66 472 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 TTC1Q99614 292 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.78□□□□□ -0.2
TVP23A-201ENST00000299866 GOLGA8IPA6NC78 632 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 GOLGA8JA6NMD2 632 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 RFX1P22670 979 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 RTP1P59025 263 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 IKQ13123 557 aaPredicted RBP13.78□□□□□ -0.2
TVP23A-201ENST00000299866 MDH1BQ5I0G3 518 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 CCDC62Q6P9F0 684 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 STXBP4Q6ZWJ1 553 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 ZBED8Q8IZ13 594 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 BBOF1Q8ND07 529 aa13.78□□□□□ -0.2
TVP23A-201ENST00000299866 DHX38Q92620 1227 aaKnown RBP13.78□□□□□ -0.2
TVP23A-201ENST00000299866 PTCD3Q96EY7 689 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms