RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 HOXB4P17483 251 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 NR2F2P24468 414 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 IGFBP6P24592 240 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 MLH1P40692 756 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 CHRNA4P43681 627 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 EFNA5P52803 228 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 ZNF445P59923 1031 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 PSMD2Q13200 908 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 IQCB1Q15051 598 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 FAM187BQ17R55 369 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 CLLU1OSQ5K130 101 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 LCE3BQ5TA77 95 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 MFSD5Q6N075 450 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 NOTUMQ6P988 496 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 LRSAM1Q6UWE0 723 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 CRELD2Q6UXH1 353 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 ZNF365Q70YC5 407 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 EXOC8Q8IYI6 725 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 PGBD3Q8N328 593 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 SEPT8Q92599 483 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 BTBD6Q96KE9 485 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 CNOT6LQ96LI5 555 aaKnown RBP7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 NTPCRQ9BSD7 190 aaKnown RBP7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 TCHPQ9BT92 498 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 NFKBIZQ9BYH8 718 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 HSD3B7Q9H2F3 369 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 C17orf75Q9HAS0 396 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 PTPRHQ9HD43 1115 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 IL23AQ9NPF7 189 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 FAM105AQ9NUU6 356 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 PRKAG2Q9UGJ0 569 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 TUBGCP4Q9UGJ1 667 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 PARP2Q9UGN5 583 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 ATXN7L1Q9ULK2 861 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 PCDHB2Q9Y5E7 798 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 RALGAPA2Q2PPJ7 1873 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 CENPFP49454 3210 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 A0A0B4J269 797 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 C9IYK1 514 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 F8W810 466 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 H0YCG3 227 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 PPEF2O14830 753 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 AP5Z1O43299 807 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 LRRN2O75325 713 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 TOM1L1O75674 476 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 CSPG5O95196 566 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 STAG3L1P0CL83 205 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 PBX3P40426 434 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 SCNN1GP51170 649 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 RABGGTBP53611 331 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 WDR5P61964 334 aaKnown RBP7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 DLG4P78352 724 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 APBA1Q02410 837 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 MCL1Q07820 350 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 ALCAMQ13740 583 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 ENOX2Q16206 610 aaKnown RBP7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 COBLL1Q53SF7 1204 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 TMEM240Q5SV17 173 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 C1orf220Q5T0J3 134 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 CENPPQ6IPU0 288 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 CNKSR3Q6P9H4 555 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 SLC27A1Q6PCB7 646 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 ZPBP2Q6X784 338 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 AGMOQ6ZNB7 445 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 STXBP4Q6ZWJ1 553 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 HS2ST1Q7LGA3 356 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 ECHDC2Q86YB7 292 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 IRF2BP1Q8IU81 584 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 CREBRFQ8IUR6 639 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 ZC3H3Q8IXZ2 948 aaKnown RBP7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 EFCAB13Q8IY85 973 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 CSGALNACT2Q8N6G5 542 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 MLKLQ8NB16 471 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 HELQQ8TDG4 1101 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 C18orf25Q96B23 403 aaPredicted RBP7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 CCDC127Q96BQ5 260 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 DHTKD1Q96HY7 919 aaPredicted RBP7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 SNX27Q96L92 541 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 ZMAT2Q96NC0 199 aaKnown RBP7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 GAD1Q99259 594 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 POP1Q99575 1024 aaKnown RBP7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 TSG101Q99816 390 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 SRRTQ9BXP5 876 aaKnown RBP7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 SEZ6LQ9BYH1 1024 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 GOLGA2P5Q9HBQ8 144 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 GPAMQ9HCL2 828 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 PDE11AQ9HCR9 933 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 FANCLQ9NW38 375 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 MIOSQ9NXC5 875 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 RWDD2AQ9UIY3 292 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 AGO2Q9UKV8 859 aaKnown RBP7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 EXOC7Q9UPT5 735 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 NFE2L3Q9Y4A8 694 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 ANK1P16157 1881 aa7.06□□□□□ -1.28
DEPDC4-201ENST00000299185 A0A1B0GUA9 196 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 SCO2A0A1W2PP80 73 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 LCHNA4D1U4 455 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 LRRIQ3A6PVS8 624 aaPredicted RBP7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 LACTBL1A8MY62 500 aa7.05□□□□□ -1.28
DEPDC4-201ENST00000299185 PDXKO00764 312 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms