RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 ATAD3AQ9NVI7 634 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 RNF103O00237 685 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 SNAPC5O75971 98 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 BCAR1P56945 870 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 RPS6P62753 249 aaKnown RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 DSG1Q02413 1049 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 VPS72Q15906 364 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 MAPK6Q16659 721 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 SUPT20HL1Q3ZLR7 823 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 COBLL1Q53SF7 1204 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 PKN3Q6P5Z2 889 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 MTERF3Q96E29 417 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 PCMTD2Q9NV79 361 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 FBXO2Q9UK22 296 aaPredicted RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 CDYLQ9Y232 598 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 PHF20L1A8MW92 1017 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 RHOBTB1O94844 696 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 SERPINB3P29508 390 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 CENPAP49450 140 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 TTC23LQ6PF05 361 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 PRPF39Q86UA1 669 aaKnown RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 GPD1LQ8N335 351 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 DDHD1Q8NEL9 900 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 DCAF4Q8WV16 495 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 GJD4Q96KN9 370 aaPredicted RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 CCDC134Q9H6E4 229 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 CD274Q9NZQ7 290 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 USP17L15C9J2P7 530 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 USP17L13C9JLJ4 530 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 USP17L11C9JVI0 530 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 USP17L18D6R9N7 530 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 USP17L22D6RA61 530 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 USP17L17D6RBQ6 530 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 USP17L19D6RCP7 530 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 USP17L20D6RJB6 530 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 TCF3P15923 654 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 USP17L24Q0WX57 530 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 RABGAP1LQ5R372 815 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 USP17L6PQ6QN14 398 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 DDX53Q86TM3 631 aaKnown RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 TBC1D10CQ8IV04 446 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 SH2D3CQ8N5H7 860 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 OSBP2Q969R2 916 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 TMEM260Q9NX78 707 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 POTECB2RU33 542 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 STX7O15400 261 aaKnown RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 ILF2Q12905 390 aaKnown RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 CENPPQ6IPU0 288 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 SUGP1Q8IWZ8 645 aaKnown RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 RAB42Q8N4Z0 105 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 COG1Q8WTW3 980 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 GPR101Q96P66 508 aaPredicted RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 TRAPPC9Q96Q05 1148 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 PSMC3IPQ9P2W1 217 aaPredicted RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 CIDEBQ9UHD4 219 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 STAP1Q9ULZ2 295 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 MTRF1O75570 445 aaKnown RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 AGTP01019 485 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 ATP5BP06576 529 aaKnown RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 IYDQ6PHW0 289 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 ARMCX6Q7L4S7 300 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 FAM160B2Q86V87 743 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 MCPH1Q8NEM0 835 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 TOPORSQ9NS56 1045 aaPredicted RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 SMG5Q9UPR3 1016 aaKnown RBP5.83□□□□□ -1.48
CPSF2-201ENST00000298875 MYO3BQ8WXR4 1341 aa5.83□□□□□ -1.48
CPSF2-201ENST00000298875 ZBTB5O15062 677 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 KNOP1Q1ED39 458 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 STX12Q86Y82 276 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 SRPK1Q96SB4 655 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 SENP7Q9BQF6 1050 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 SIKE1Q9BRV8 207 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 TRIM51Q9BSJ1 452 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RMI1Q9H9A7 625 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 MARCOQ9UEW3 520 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 FARP1Q9Y4F1 1045 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RGL2O15211 777 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 EIF3HO15372 352 aaKnown RBP eCLIP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 TOB2Q14106 344 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 DRAP1Q14919 205 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RUNDC3AQ59EK9 446 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 PCNX4Q63HM2 1172 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 TBC1D19Q8N5T2 526 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 MRPL4Q9BYD3 311 aaKnown RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 OLFML3Q9NRN5 406 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 ARHGEF38Q9NXL2 777 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 NFIBO00712 420 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 TTKP33981 857 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 MCAMP43121 646 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 SESN2P58004 480 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-201ENST00000298875 TAP1Q03518 808 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 SCFD1Q8WVM8 642 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 CPA5Q8WXQ8 436 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RMDN3Q96TC7 470 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 THTPAQ9BU02 230 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RNPEPQ9H4A4 650 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 BTBD7Q9P203 1132 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 PRAMEF22A3QJZ6 481 aa5.82□□□□□ -1.48
CPSF2-201ENST00000298875 RAD17O75943 681 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms