RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 HSP90AA2PQ14568 343 aaPredicted RBP27.46■■□□□ 1.99
SDCCAG3-201ENST00000298537 HDAC7Q8WUI4 952 aa27.46■■□□□ 1.99
SDCCAG3-201ENST00000298537 HES2Q9Y543 173 aa27.46■■□□□ 1.99
SDCCAG3-201ENST00000298537 TMEM110-MUSTN1A8MSY1 372 aa27.46■■□□□ 1.99
SDCCAG3-201ENST00000298537 C6orf222P0C671 652 aaPredicted RBP27.46■■□□□ 1.99
SDCCAG3-201ENST00000298537 UNGP13051 313 aaPredicted RBP27.46■■□□□ 1.99
SDCCAG3-201ENST00000298537 CPT1AP50416 773 aa27.46■■□□□ 1.99
SDCCAG3-201ENST00000298537 AP3M2P53677 418 aa27.46■■□□□ 1.99
SDCCAG3-201ENST00000298537 EIF2AQ9BY44 585 aaKnown RBP27.46■■□□□ 1.99
SDCCAG3-201ENST00000298537 IMPG2Q9BZV3 1241 aa27.46■■□□□ 1.99
SDCCAG3-201ENST00000298537 NXF1Q9UBU9 619 aaKnown RBP27.46■■□□□ 1.99
SDCCAG3-201ENST00000298537 PGK1P00558 417 aa27.45■■□□□ 1.99
SDCCAG3-201ENST00000298537 PRKCZQ05513 592 aa27.45■■□□□ 1.99
SDCCAG3-201ENST00000298537 ZNF699Q32M78 642 aa27.45■■□□□ 1.99
SDCCAG3-201ENST00000298537 ACAD10Q6JQN1 1059 aa27.45■■□□□ 1.99
SDCCAG3-201ENST00000298537 ZNF410Q86VK4 478 aa27.45■■□□□ 1.99
SDCCAG3-201ENST00000298537 ZNF653Q96CK0 615 aa27.45■■□□□ 1.99
SDCCAG3-201ENST00000298537 ANKRD36BP1Q96IX9 119 aa27.45■■□□□ 1.99
SDCCAG3-201ENST00000298537 ZSWIM1Q9BR11 485 aa27.45■■□□□ 1.99
SDCCAG3-201ENST00000298537 GNA15P30679 374 aa27.45■■□□□ 1.98
SDCCAG3-201ENST00000298537 ASPAP45381 313 aa27.45■■□□□ 1.98
SDCCAG3-201ENST00000298537 LACTBP83111 547 aaPredicted RBP27.45■■□□□ 1.98
SDCCAG3-201ENST00000298537 PURAQ00577 322 aaKnown RBP27.45■■□□□ 1.98
SDCCAG3-201ENST00000298537 SURF1Q15526 300 aa27.45■■□□□ 1.98
SDCCAG3-201ENST00000298537 NAA35Q5VZE5 725 aa27.45■■□□□ 1.98
SDCCAG3-201ENST00000298537 ZNF572Q7Z3I7 529 aaPredicted RBP27.45■■□□□ 1.98
SDCCAG3-201ENST00000298537 CXorf38Q8TB03 319 aa27.45■■□□□ 1.98
SDCCAG3-201ENST00000298537 PLEKHA4Q9H4M7 779 aa27.45■■□□□ 1.98
SDCCAG3-201ENST00000298537 NPTXRO95502 500 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 TNNC2P02585 160 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 ITGB3P05106 788 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 IRF5Q13568 498 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 SGSM1Q2NKQ1 1148 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 LRRC1Q9BTT6 524 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 CISHQ9NSE2 258 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 CNTN6Q9UQ52 1028 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 SPDYE4A6NLX3 237 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 AKR1A1P14550 325 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 TBXAS1P24557 533 aaPredicted RBP27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 CC2D1AQ6P1N0 951 aaPredicted RBP27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 SMC1BQ8NDV3 1235 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 HES6Q96HZ4 224 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 FAM81BQ96LP2 452 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 NUP85Q9BW27 656 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 TRIM7Q9C029 511 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 NIF3L1Q9GZT8 377 aa27.44■■□□□ 1.98
SDCCAG3-201ENST00000298537 SMIM35A0A1B0GVV1 85 aa27.43■■□□□ 1.98
SDCCAG3-201ENST00000298537 CDH8P55286 799 aa27.43■■□□□ 1.98
SDCCAG3-201ENST00000298537 DCAF12L1Q5VU92 463 aa27.43■■□□□ 1.98
SDCCAG3-201ENST00000298537 ZBTB9Q96C00 473 aa27.43■■□□□ 1.98
SDCCAG3-201ENST00000298537 RAB21Q9UL25 225 aa27.43■■□□□ 1.98
SDCCAG3-201ENST00000298537 CYBAP13498 195 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 ORC1Q13415 861 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 CFAP221Q4G0U5 840 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 CATSPER4Q7RTX7 472 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 RHOT2Q8IXI1 618 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 TAF4BQ92750 862 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 ALG6Q9Y672 507 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 DDX3YO15523 660 aaKnown RBP27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 THAP12O43422 761 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 IL18RAPO95256 599 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 PAFAH1B1P43034 410 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 MARCKSL1P49006 195 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 ZNF132P52740 706 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 FCGRTP55899 365 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 MESDQ14696 234 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 GCOM2Q9BZD3 368 aaPredicted RBP27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 SNTG2Q9NY99 539 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 AMFRQ9UKV5 643 aa27.42■■□□□ 1.98
SDCCAG3-201ENST00000298537 CEP104O60308 925 aa27.41■■□□□ 1.98
SDCCAG3-201ENST00000298537 SLC7A5Q01650 507 aa27.41■■□□□ 1.98
SDCCAG3-201ENST00000298537 MTERF4Q7Z6M4 381 aaKnown RBP27.41■■□□□ 1.98
SDCCAG3-201ENST00000298537 RPGRIP1Q96KN7 1286 aa27.41■■□□□ 1.98
SDCCAG3-201ENST00000298537 SDCBP2Q9H190 292 aa27.41■■□□□ 1.98
SDCCAG3-201ENST00000298537 PDCL3Q9H2J4 239 aa27.41■■□□□ 1.98
SDCCAG3-201ENST00000298537 CNOT8Q9UFF9 292 aaKnown RBP27.41■■□□□ 1.98
SDCCAG3-201ENST00000298537 ZRANB2O95218 330 aaKnown RBP eCLIP27.41■■□□□ 1.984e-7■■■■■ 40.3
SDCCAG3-201ENST00000298537 CYP1A1P04798 512 aaPredicted RBP27.41■■□□□ 1.98
SDCCAG3-201ENST00000298537 CYP1A2P05177 515 aa27.41■■□□□ 1.98
SDCCAG3-201ENST00000298537 BRD2P25440 801 aaKnown RBP27.41■■□□□ 1.98
SDCCAG3-201ENST00000298537 CXCL17Q6UXB2 119 aa27.41■■□□□ 1.98
SDCCAG3-201ENST00000298537 SYCE1Q8N0S2 351 aa27.41■■□□□ 1.98
SDCCAG3-201ENST00000298537 ARGLU1Q9NWB6 273 aaPredicted RBP27.41■■□□□ 1.98
SDCCAG3-201ENST00000298537 DARSP14868 501 aaKnown RBP27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 RRM1P23921 792 aa27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 WDR72Q3MJ13 1102 aa27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 GNASQ5JWF2 1037 aa27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 AADACL2Q6P093 401 aa27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 TMCO3Q6UWJ1 677 aa27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 MCOLN2Q8IZK6 566 aa27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 ZNF564Q8TBZ8 553 aaPredicted RBP27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 ALG3Q92685 438 aa27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 KRT35Q92764 455 aa27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 DMGDHQ9UI17 866 aaKnown RBP27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 MROH7Q68CQ1 1323 aa27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 GSPT2Q8IYD1 628 aaKnown RBP27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 MMGT1Q8N4V1 131 aa27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 ZNF606Q8WXB4 792 aa27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 TFAP2BQ92481 460 aa27.4■■□□□ 1.98
SDCCAG3-201ENST00000298537 ACAP3Q96P50 834 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms