RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 GLRA4Q5JXX5 417 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 SLC24A5Q71RS6 500 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 UBE2Q1Q7Z7E8 422 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 ECHDC2Q86YB7 292 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 FMNL3Q8IVF7 1028 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 FAM71AQ8IYT1 594 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 CCDC170Q8IYT3 715 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 DBF4BQ8NFT6 615 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 LPPQ93052 612 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 FAXDC2Q96IV6 333 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 RNF19AQ9NV58 838 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 EPN1Q9Y6I3 576 aaPredicted RBP26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 SSU72P8A0A1W2PR75 194 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 EVI5O60447 810 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 KRT19P08727 400 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 CUL2Q13617 745 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 BEST2Q8NFU1 509 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 C18orf25Q96B23 403 aaPredicted RBP26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 ZFP42Q96MM3 310 aa26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 PPP1R10Q96QC0 940 aaKnown RBP26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 BZW2Q9Y6E2 419 aaKnown RBP26.47■■□□□ 1.83
GTF2A1-201ENST00000298173 GFPT2O94808 682 aa26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 CLTBP09497 229 aa26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 TBXAS1P24557 533 aaPredicted RBP26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 POLR2BP30876 1174 aaKnown RBP26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 CYP2C18P33260 490 aa26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 GPIHBP1Q8IV16 184 aa26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 PGBD4Q96DM1 585 aa26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 SCLYQ96I15 445 aa26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 GAD1Q99259 594 aa26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 ARID3AQ99856 593 aa26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 MIOSQ9NXC5 875 aa26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 TUBGCP4Q9UGJ1 667 aa26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 AGAP1Q9UPQ3 857 aa26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 SCN1AP35498 2009 aa26.46■■□□□ 1.83
GTF2A1-201ENST00000298173 ANO9A1A5B4 782 aa26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 EOMESO95936 686 aa26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 ACO1P21399 889 aaKnown RBP26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 MSNP26038 577 aaKnown RBP26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 ARID5AQ03989 594 aa26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 KLHL30Q0D2K2 578 aa26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 ZNF699Q32M78 642 aa26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 SMYD5Q6GMV2 418 aa26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 TOGARAM2Q6ZUX3 1019 aa26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 APBB2Q92870 758 aa26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 PPP1R12CQ9BZL4 782 aa26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 HAUS4Q9H6D7 363 aa26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 UBN1Q9NPG3 1134 aa26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 TMEM39AQ9NV64 488 aa26.45■■□□□ 1.82
GTF2A1-201ENST00000298173 ARL5CA6NH57 179 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 XPOTO43592 962 aaKnown RBP26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 NDUFA10O95299 355 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 EIF4A3P38919 411 aaKnown RBP26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 MLH1P40692 756 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 AFF1P51825 1210 aaKnown RBP26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 CCL23P55773 120 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 SOX4Q06945 474 aaPredicted RBP26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 NAB2Q15742 525 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 UBR7Q8N806 425 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 SEPT8Q92599 483 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 NIF3L1Q9GZT8 377 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 CNTN6Q9UQ52 1028 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 PIRO00625 290 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 ENPP3O14638 875 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 INPPL1O15357 1258 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 CCDC172P0C7W6 258 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 CLCN1P35523 988 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 PTK2Q05397 1052 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 TCTN1Q2MV58 587 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 C17orf53Q8N3J3 647 aaPredicted RBP26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 HPDLQ96IR7 371 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 CCDC42Q96M95 316 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 RSAD1Q9HA92 442 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 ADGRG1Q9Y653 693 aa26.44■■□□□ 1.82
GTF2A1-201ENST00000298173 EN2P19622 333 aaPredicted RBP26.43■■□□□ 1.82
GTF2A1-201ENST00000298173 ASPAP45381 313 aa26.43■■□□□ 1.82
GTF2A1-201ENST00000298173 C9orf57Q5W0N0 161 aa26.43■■□□□ 1.82
GTF2A1-201ENST00000298173 ZNF571Q7Z3V5 609 aaPredicted RBP26.43■■□□□ 1.82
GTF2A1-201ENST00000298173 SYT11Q9BT88 431 aa26.43■■□□□ 1.82
GTF2A1-201ENST00000298173 EIF3CLB5ME19 914 aaKnown RBP26.42■■□□□ 1.82
GTF2A1-201ENST00000298173 LCA5LO95447 670 aa26.42■■□□□ 1.82
GTF2A1-201ENST00000298173 LRPAP1P30533 357 aa26.42■■□□□ 1.82
GTF2A1-201ENST00000298173 WDR72Q3MJ13 1102 aa26.42■■□□□ 1.82
GTF2A1-201ENST00000298173 ZNF667Q5HYK9 610 aa26.42■■□□□ 1.82
GTF2A1-201ENST00000298173 CCAR2Q8N163 923 aaKnown RBP26.42■■□□□ 1.82
GTF2A1-201ENST00000298173 LRRC52Q8N7C0 313 aa26.42■■□□□ 1.82
GTF2A1-201ENST00000298173 VWCEQ96DN2 955 aa26.42■■□□□ 1.82
GTF2A1-201ENST00000298173 EIF3CQ99613 913 aaKnown RBP26.42■■□□□ 1.82
GTF2A1-201ENST00000298173 BCO2Q9BYV7 579 aa26.42■■□□□ 1.82
GTF2A1-201ENST00000298173 PPEF2O14830 753 aa26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 THP07101 528 aa26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 CYLC1P35663 651 aaPredicted RBP26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 TDRD12Q587J7 1177 aaKnown RBP26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 OLIG1Q8TAK6 271 aa26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 SLC38A7Q9NVC3 462 aa26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 KIAA0355O15063 1070 aa26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 CYP26A1O43174 497 aa26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 ZNF500O60304 480 aaPredicted RBP26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 OFD1O75665 1012 aa26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 RPS6KC1Q96S38 1066 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms