RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 CETN1Q12798 172 aa16.58■□□□□ 0.24
UBAP1-201ENST00000297661 TBC1D25Q3MII6 688 aa16.58■□□□□ 0.24
UBAP1-201ENST00000297661 DAB2IPQ5VWQ8 1189 aa16.58■□□□□ 0.24
UBAP1-201ENST00000297661 PI4K2AQ9BTU6 479 aa16.58■□□□□ 0.24
UBAP1-201ENST00000297661 TMEM109Q9BVC6 243 aa16.58■□□□□ 0.24
UBAP1-201ENST00000297661 NUP85Q9BW27 656 aa16.58■□□□□ 0.24
UBAP1-201ENST00000297661 ZNF408Q9H9D4 720 aa16.58■□□□□ 0.24
UBAP1-201ENST00000297661 KCND2Q9NZV8 630 aa16.58■□□□□ 0.24
UBAP1-201ENST00000297661 PRKAG3Q9UGI9 489 aa16.58■□□□□ 0.24
UBAP1-201ENST00000297661 SH3BP1Q9Y3L3 701 aa16.58■□□□□ 0.24
UBAP1-201ENST00000297661 TMEM120BA0PK00 339 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 SPOPO43791 374 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 PEX11AO75192 247 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 SP4Q02446 784 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 MTMR1Q13613 665 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 ARMC3Q5W041 872 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 LLGL2Q6P1M3 1020 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 CCDC137Q6PK04 289 aaKnown RBP16.57■□□□□ 0.24
UBAP1-201ENST00000297661 RHOT2Q8IXI1 618 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 ZFAND2BQ8WV99 257 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 TAAR1Q96RJ0 339 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 RPS6KC1Q96S38 1066 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 RIT2Q99578 217 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 GRHL1Q9NZI5 618 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 ATP8B3O60423 1300 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 FAM187AA6NFU0 413 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 CREB1P16220 341 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 ADSSP30520 456 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 SKIV2L2P42285 1042 aaKnown RBP16.57■□□□□ 0.24
UBAP1-201ENST00000297661 PTGIRP43119 386 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 QARSP47897 775 aaKnown RBP16.57■□□□□ 0.24
UBAP1-201ENST00000297661 RNASELQ05823 741 aaKnown RBP16.57■□□□□ 0.24
UBAP1-201ENST00000297661 MGAT5Q09328 741 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 LBRQ14739 615 aaKnown RBP16.57■□□□□ 0.24
UBAP1-201ENST00000297661 TMEM154Q6P9G4 183 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 UBL4BQ8N7F7 174 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 AGO4Q9HCK5 861 aaKnown RBP16.57■□□□□ 0.24
UBAP1-201ENST00000297661 NOCTQ9UK39 431 aaKnown RBP16.57■□□□□ 0.24
UBAP1-201ENST00000297661 TELO2Q9Y4R8 837 aa16.57■□□□□ 0.24
UBAP1-201ENST00000297661 RIPK2O43353 540 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 TPBGLP0DKB5 382 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 ALDH3A1P30838 453 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 KLC1Q07866 573 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 SGSM1Q2NKQ1 1148 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 XKR9Q5GH70 373 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 APLFQ8IW19 511 aaPredicted RBP16.56■□□□□ 0.24
UBAP1-201ENST00000297661 CCDC105Q8IYK2 499 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 ANKRD42Q8N9B4 389 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 ANKLE1Q8NAG6 615 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 STK32AQ8WU08 396 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 CLEC4DQ8WXI8 215 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 ZNF653Q96CK0 615 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 FAM210AQ96ND0 272 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 NAP1L3Q99457 506 aaPredicted RBP16.56■□□□□ 0.24
UBAP1-201ENST00000297661 TMEM206Q9H813 350 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 DNAJC17Q9NVM6 304 aaKnown RBP16.56■□□□□ 0.24
UBAP1-201ENST00000297661 KLHL14Q9P2G3 628 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 PHF2O75151 1096 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 DLATP10515 647 aaKnown RBP16.56■□□□□ 0.24
UBAP1-201ENST00000297661 SSTR3P32745 418 aaPredicted RBP16.56■□□□□ 0.24
UBAP1-201ENST00000297661 PEX5P50542 639 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 FMO1Q01740 532 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 DHX34Q14147 1143 aaKnown RBP16.56■□□□□ 0.24
UBAP1-201ENST00000297661 RASA3Q14644 834 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 PPP2R5EQ16537 467 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 SNRNP35Q16560 246 aaKnown RBP16.56■□□□□ 0.24
UBAP1-201ENST00000297661 ZC3H12AQ5D1E8 599 aaKnown RBP16.56■□□□□ 0.24
UBAP1-201ENST00000297661 KCTD17Q8N5Z5 321 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 GDAP1Q8TB36 358 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 ZNF564Q8TBZ8 553 aaPredicted RBP16.56■□□□□ 0.24
UBAP1-201ENST00000297661 ZCWPW1Q9H0M4 648 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 CYP39A1Q9NYL5 469 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 WDR35Q9P2L0 1181 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 FEM1BQ9UK73 627 aa16.56■□□□□ 0.24
UBAP1-201ENST00000297661 E7ENQ6 273 aa16.55■□□□□ 0.24
UBAP1-201ENST00000297661 HSD17B4P51659 736 aa16.55■□□□□ 0.24
UBAP1-201ENST00000297661 DRG2P55039 364 aaKnown RBP16.55■□□□□ 0.24
UBAP1-201ENST00000297661 LMBRD2Q68DH5 695 aaPredicted RBP16.55■□□□□ 0.24
UBAP1-201ENST00000297661 TAS1R2Q8TE23 839 aa16.55■□□□□ 0.24
UBAP1-201ENST00000297661 C1orf54Q8WWF1 131 aa16.55■□□□□ 0.24
UBAP1-201ENST00000297661 EZH1Q92800 747 aaPredicted RBP16.55■□□□□ 0.24
UBAP1-201ENST00000297661 MTRF1LQ9UGC7 380 aaKnown RBP16.55■□□□□ 0.24
UBAP1-201ENST00000297661 RASAL2Q9UJF2 1139 aa16.55■□□□□ 0.24
UBAP1-201ENST00000297661 SYNGAP1Q96PV0 1343 aa16.55■□□□□ 0.24
UBAP1-201ENST00000297661 TESPA1A2RU30 521 aaPredicted RBP16.55■□□□□ 0.24
UBAP1-201ENST00000297661 FOXO6A8MYZ6 492 aa16.55■□□□□ 0.24
UBAP1-201ENST00000297661 RNF8O76064 485 aa16.55■□□□□ 0.24
UBAP1-201ENST00000297661 ICAM1P05362 532 aa16.55■□□□□ 0.24
UBAP1-201ENST00000297661 GM2AP17900 193 aa16.55■□□□□ 0.24
UBAP1-201ENST00000297661 TRIP13Q15645 432 aaPredicted RBP16.55■□□□□ 0.24
UBAP1-201ENST00000297661 MFSD5Q6N075 450 aa16.55■□□□□ 0.24
UBAP1-201ENST00000297661 ARHGEF2Q92974 986 aaKnown RBP16.55■□□□□ 0.24
UBAP1-201ENST00000297661 EPAS1Q99814 870 aa16.55■□□□□ 0.24
UBAP1-201ENST00000297661 CLDN3O15551 220 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 CCNE2O96020 404 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 PYGLP06737 847 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 SP100P23497 879 aaPredicted RBP16.54■□□□□ 0.24
UBAP1-201ENST00000297661 RFC5P40937 340 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 LONRF1Q17RB8 773 aa16.54■□□□□ 0.24
UBAP1-201ENST00000297661 SEL1L2Q5TEA6 688 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms