RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 KANSL1LA0AUZ9 987 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 MED19A0JLT2 244 aaPredicted RBP10.22□□□□□ -0.77
CNOT9-202ENST00000295701 FAM170BA6NMN3 283 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 B3GAT3O94766 335 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 HNRNPA1P09651 372 aaKnown RBP eCLIP10.22□□□□□ -0.77
CNOT9-202ENST00000295701 CCNYL3P0C7X3 344 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 FGFR3P22607 806 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 CLCNKBP51801 687 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 SOX4Q06945 474 aaPredicted RBP10.22□□□□□ -0.77
CNOT9-202ENST00000295701 RAB33AQ14088 237 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 UBXN2BQ14CS0 331 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 ANKRD1Q15327 319 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 MAPK6Q16659 721 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 SLC5A9Q2M3M2 681 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 NPAS3Q8IXF0 933 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 C3orf58Q8NDZ4 430 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 DEPTORQ8TB45 409 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 PRR7Q8TB68 274 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 PPP1R10Q96QC0 940 aaKnown RBP10.22□□□□□ -0.77
CNOT9-202ENST00000295701 DDX23Q9BUQ8 820 aaKnown RBP10.22□□□□□ -0.77
CNOT9-202ENST00000295701 MTRRQ9UBK8 725 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 CDY1Q9Y6F8 540 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 MYH11P35749 1972 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 ZMYM2Q9UBW7 1377 aa10.22□□□□□ -0.77
CNOT9-202ENST00000295701 SPTBN2O15020 2390 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 ARHGEF35A5YM69 484 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 J3QL48 77 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 XYLBO75191 536 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 TARSP26639 723 aaKnown RBP10.21□□□□□ -0.77
CNOT9-202ENST00000295701 RPA1P27694 616 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 HOXA9P31269 272 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 NAMPTP43490 491 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 SMCPP49901 116 aaPredicted RBP10.21□□□□□ -0.77
CNOT9-202ENST00000295701 OSTNP61366 133 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 CSTF1Q05048 431 aaKnown RBP10.21□□□□□ -0.77
CNOT9-202ENST00000295701 PTPRNQ16849 979 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 PABPC1LQ4VXU2 614 aaKnown RBP10.21□□□□□ -0.77
CNOT9-202ENST00000295701 TANGO2Q6ICL3 276 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.21□□□□□ -0.77
CNOT9-202ENST00000295701 ERMP1Q7Z2K6 904 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 SUMF1Q8NBK3 374 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 TCEAL4Q96EI5 215 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 ZMAT2Q96NC0 199 aaKnown RBP10.21□□□□□ -0.77
CNOT9-202ENST00000295701 HINFPQ9BQA5 517 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 ADPGKQ9BRR6 497 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 C2orf40Q9H1Z8 148 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 SEMA4AQ9H3S1 761 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 SPATA6Q9NWH7 488 aaPredicted RBP10.21□□□□□ -0.77
CNOT9-202ENST00000295701 DACH1Q9UI36 760 aa10.21□□□□□ -0.77
CNOT9-202ENST00000295701 ZFP37Q9Y6Q3 630 aaPredicted RBP10.21□□□□□ -0.77
CNOT9-202ENST00000295701 PDCD11Q14690 1871 aaKnown RBP10.21□□□□□ -0.78
CNOT9-202ENST00000295701 CACNA1AO00555 2505 aa10.21□□□□□ -0.78
CNOT9-202ENST00000295701 SMIM28A0A1B0GU29 152 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 SHISA7A6NL88 538 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 TMEM189-UBE2V1I3L0A0 370 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 MEFVO15553 781 aaPredicted RBP10.2□□□□□ -0.78
CNOT9-202ENST00000295701 SEC24AO95486 1093 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 RHOP08100 348 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 OR52Z1P0C646 297 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 CEBPBP17676 345 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 NEK4P51957 841 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 ARPP19P56211 112 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 ANAPC15P60006 121 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 ELAVL2Q12926 359 aaKnown RBP10.2□□□□□ -0.78
CNOT9-202ENST00000295701 FZD5Q13467 585 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 TRIM29Q14134 588 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 UPP1Q16831 310 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 UVSSAQ2YD98 709 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 ATF7IP2Q5U623 682 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 TSSK4Q6SA08 328 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 ALKAL1Q6UXT8 129 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 MTSS1LQ765P7 747 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 TAS1R3Q7RTX0 852 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 C4orf32Q8N8J7 132 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 SHDQ96IW2 340 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 BHMT2Q9H2M3 363 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 LTB4R2Q9NPC1 389 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 KIAA1024Q9UPX6 916 aa10.2□□□□□ -0.78
CNOT9-202ENST00000295701 MRPS23Q9Y3D9 190 aaKnown RBP10.2□□□□□ -0.78
CNOT9-202ENST00000295701 ATG2BQ96BY7 2078 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 TICRRQ7Z2Z1 1910 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 ANK1P16157 1881 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 WDR27A2RRH5 827 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 K7ERI5 159 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 LAMTOR5O43504 91 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 CCT6AP40227 531 aaKnown RBP10.19□□□□□ -0.78
CNOT9-202ENST00000295701 CCR2P41597 374 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 ROR1Q01973 937 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 PRKCQQ04759 706 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 DCAF4L1Q3SXM0 396 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 DESI1Q6ICB0 168 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 TPRG1Q6ZUI0 275 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 CCDC83Q8IWF9 413 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 RUBCNQ92622 972 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 C18orf25Q96B23 403 aaPredicted RBP10.19□□□□□ -0.78
CNOT9-202ENST00000295701 ZBTB45Q96K62 511 aaPredicted RBP10.19□□□□□ -0.78
CNOT9-202ENST00000295701 IFT74Q96LB3 600 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 ACO2Q99798 780 aaKnown RBP10.19□□□□□ -0.78
CNOT9-202ENST00000295701 CORO1BQ9BR76 489 aa10.19□□□□□ -0.78
CNOT9-202ENST00000295701 TARS2Q9BW92 718 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms