RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CYP4A22Q5TCH4 519 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 NFRKBQ6P4R8 1299 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 ULK4Q96C45 1275 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 IL17RBQ9NRM6 502 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 HACD3Q9P035 362 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 KIAA1257Q9ULG3 409 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 THP07101 528 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 INSRRP14616 1297 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 FKBP1BP68106 108 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 NNTQ13423 1086 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 C10orf120Q5SQS8 335 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 IL31Q6EBC2 164 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 MCEEQ96PE7 176 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 HSPA4LO95757 839 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 GTF2H1P32780 548 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 TLK2Q86UE8 772 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 SLC7A14Q8TBB6 771 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 DDX47Q9H0S4 455 aaKnown RBP18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 MUC3BQ9H195 1237 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 VPS11Q9H270 941 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 VCX3AQ9NNX9 186 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 SETD4Q9NVD3 440 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 DPP7Q9UHL4 492 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 EEF2KO00418 725 aaKnown RBP18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 TTC19Q6DKK2 380 aaPredicted RBP18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 IQSEC1Q6DN90 963 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 DCUN1D1Q96GG9 259 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 BAIAP2L1Q9UHR4 511 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 NCK2O43639 380 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 DCAF6Q58WW2 860 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 PPM1NQ8N819 430 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 DSEQ9UL01 958 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 SEC31AO94979 1220 aaKnown RBP18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 YY1P25490 414 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 GRIK4Q16099 956 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 CHSY1Q86X52 802 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 VGLL2Q8N8G2 317 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 RAPGEF5Q92565 580 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 RNPC3Q96LT9 517 aaKnown RBP18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 ZBTB18Q99592 522 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 DBR1Q9UK59 544 aaKnown RBP18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 MROH1Q8NDA8 1641 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 EGFRP00533 1210 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 IRF1P10914 325 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 SLC2A3P11169 496 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 RAB27AP51159 221 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 NOGQ13253 232 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 ATP11CQ8NB49 1132 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 SH3KBP1Q96B97 665 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 DRC3Q9H069 523 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 KANSL3Q9P2N6 904 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 A0A087WZ62 844 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 UBA6A0AVT1 1052 aaPredicted RBP18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 OCRLQ01968 901 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 LY6KQ17RY6 165 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 PAN2Q504Q3 1202 aaKnown RBP18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 ANKS1AQ92625 1134 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 SNF8Q96H20 258 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 FDXACB1Q9BRP7 624 aaPredicted RBP18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 RNF208Q9H0X6 261 aa18.64■□□□□ 0.57
CDC42EP3-201ENST00000295324 WDR91A4D1P6 747 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 F5H423 210 aaPredicted RBP18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 ZNF286BP0CG31 522 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 CCDC15Q0P6D6 951 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 ACVR2BQ13705 512 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 ATL2Q8NHH9 583 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 PPP1R2P1Q96PQ5 205 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 PI4K2AQ9BTU6 479 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 MSCO60682 206 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 DHX34Q14147 1143 aaKnown RBP18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 SLC30A10Q6XR72 485 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 C1orf54Q8WWF1 131 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 PABPC5Q96DU9 382 aaKnown RBP18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 DDX27Q96GQ7 796 aaKnown RBP18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 ENTPD7Q9NQZ7 604 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 NDFIP2Q9NV92 336 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 FAM198AQ9UFP1 575 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 SUN2Q9UH99 717 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 HMGB1P1B2RPK0 211 aaPredicted RBP18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 ZC3H11AO75152 810 aaKnown RBP eCLIP18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 RPL10AP62906 217 aaKnown RBP18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 PDIA2Q13087 525 aaKnown RBP18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 CUL2Q13617 745 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 LAMB3Q13751 1172 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 UBA3Q8TBC4 463 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 MRPS31Q92665 395 aaKnown RBP18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 OSMRQ99650 979 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 EPS15L1Q9UBC2 864 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 USH1CQ9Y6N9 552 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 CFAP69A5D8W1 941 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 SETSIPP0DME0 302 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 RGMBQ6NW40 437 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 RAB42Q8N4Z0 105 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 SLC35G2Q8TBE7 412 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 NCAM1P13591 858 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 GPD1P21695 349 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 PTF1AQ7RTS3 328 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 FGD4Q96M96 766 aa18.63■□□□□ 0.57
CDC42EP3-201ENST00000295324 A0A087WUV0 522 aaPredicted RBP18.62■□□□□ 0.57
CDC42EP3-201ENST00000295324 GRIN1Q05586 938 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms