RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 GOLGA8SH3BPF8 625 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 GOLGA8MH3BSY2 632 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 P4HBP07237 508 aaKnown RBP14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 PLS3P13797 630 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 MAPK4P31152 587 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 CAP2P40123 477 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 QARSP47897 775 aaKnown RBP14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 ITGA8P53708 1063 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 CETN1Q12798 172 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 EMC10Q5UCC4 262 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 STXBP4Q6ZWJ1 553 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 ANO5Q75V66 913 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 RHOT2Q8IXI1 618 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 SRRM1Q8IYB3 904 aaKnown RBP14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 ARHGEF2Q92974 986 aaKnown RBP14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 STRA6Q9BX79 667 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 TMOD2Q9NZR1 351 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 NRXN2Q9P2S2 1712 aa14.11□□□□□ -0.15
KCNIP3-201ENST00000295225 COL11A2P13942 1736 aaPredicted RBP14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 SYNGAP1Q96PV0 1343 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 HNRNPDLO14979 420 aaKnown RBP14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 SLC15A2Q16348 729 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 CCDC197Q8NCU1 140 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 HELQQ8TDG4 1101 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 C12orf65Q9H3J6 166 aaKnown RBP14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 SAE1Q9UBE0 346 aaPredicted RBP14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 RASAL2Q9UJF2 1139 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 ODF2LQ9ULJ1 636 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 UMODL1Q5DID0 1318 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 RALAP11233 206 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 CTNNA2P26232 953 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 HOXD10P28358 340 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 ADCY8P40145 1251 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 HOOK3Q86VS8 718 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 FAM71AQ8IYT1 594 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 PARD3BQ8TEW8 1205 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 CHURC1Q8WUH1 139 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 KCNN1Q92952 543 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 NACC2Q96BF6 587 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 MPP4Q96JB8 637 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 PAGR1Q9BTK6 254 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 HOXC10Q9NYD6 342 aa14.1□□□□□ -0.15
KCNIP3-201ENST00000295225 PTPRJQ12913 1337 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 UBOX5O94941 541 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 CHRNA3P32297 505 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 MMP13P45452 471 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 PDE6CP51160 858 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 TAS2R40P59535 323 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 CALCOCO2Q13137 446 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 KRT72Q14CN4 511 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 CLEC4DQ8WXI8 215 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 CD101Q93033 1021 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 CEP170P1Q96L14 293 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 AGO4Q9HCK5 861 aaKnown RBP14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 MTRF1LQ9UGC7 380 aaKnown RBP14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 TNNI1P19237 187 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 RNASELQ05823 741 aaKnown RBP14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 ZNF516Q92618 1163 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 TMEM143Q96AN5 459 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 RMDN3Q96TC7 470 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 RAB20Q9NX57 234 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 UBAP1Q9NZ09 502 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 TBX20Q9UMR3 447 aa14.09□□□□□ -0.15
KCNIP3-201ENST00000295225 UPP2O95045 317 aa14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 SMTNP53814 917 aa14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 NRLP54845 237 aa14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 EN1Q05925 392 aaPredicted RBP14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 PRKG1Q13976 671 aa14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 DHX34Q14147 1143 aaKnown RBP14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 FASTKD3Q14CZ7 662 aaKnown RBP14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 CNGA2Q16280 664 aa14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 SWSAP1Q6NVH7 229 aa14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 B3GNT9Q6UX72 402 aa14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 LARGE2Q8N3Y3 721 aa14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 EZH1Q92800 747 aaPredicted RBP14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 NAP1L3Q99457 506 aaPredicted RBP14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 MMADHCQ9H3L0 296 aaPredicted RBP14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 KMT5AQ9NQR1 393 aa14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 ANKFY1Q9P2R3 1169 aa14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 SEL1LQ9UBV2 794 aa14.08□□□□□ -0.15
KCNIP3-201ENST00000295225 LRRC37AA6NMS7 1700 aa14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 KAT6AQ92794 2004 aa14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 CNTNAP1P78357 1384 aa14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 CCT8L1PA6NM43 557 aa14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 ZNF862O60290 1169 aa14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 GRIN3BO60391 1043 aa14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 YY1P25490 414 aa14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 MPP3Q13368 585 aa14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 CDR2LQ86X02 465 aaPredicted RBP14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 SYTL5Q8TDW5 730 aaPredicted RBP14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 GSTTP1A0A1W2PQM5 241 aa14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 A6NNZ2 444 aa14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 THAP12O43422 761 aa14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 ATF7P17544 494 aaPredicted RBP14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 GAD2Q05329 585 aa14.08□□□□□ -0.16
KCNIP3-201ENST00000295225 TUBB8Q3ZCM7 444 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms