RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 SGO2Q562F6 1265 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 HABP4Q5JVS0 413 aaKnown RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 WASHC2DQ5SRD0 308 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 FBXO46Q6PJ61 603 aaPredicted RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 PHF13Q86YI8 300 aaPredicted RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 SYCP3Q8IZU3 236 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 ZBTB9Q96C00 473 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 DCPSQ96C86 337 aaKnown RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 WRAP73Q9P2S5 460 aaPredicted RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 MROH7Q68CQ1 1323 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 SMCHD1A6NHR9 2005 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 LOC102724159A0A0B4J2E5 919 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 K7ENM7 598 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 MAFGO15525 162 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 DKC1O60832 514 aaKnown RBP eCLIP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 LRRN2O75325 713 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 DCTN3O75935 186 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 PROSCO94903 275 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 UBOX5O94941 541 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 SGPL1O95470 568 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 ASMTLO95671 621 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 PIGRP01833 764 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 LMNAP02545 664 aaKnown RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 ATP5BP06576 529 aaKnown RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 VIMP08670 466 aaKnown RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 QARSP47897 775 aaKnown RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 RASSF2P50749 326 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 CYP2J2P51589 502 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 ZNF211Q13398 564 aaPredicted RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 MOGSQ13724 837 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 PWP2Q15269 919 aaKnown RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 CCDC38Q502W7 563 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 MCF2L2Q86YR7 1114 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 MCOLN2Q8IZK6 566 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 FBXL13Q8NEE6 735 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 CYP2W1Q8TAV3 490 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 PIGOQ8TEQ8 1089 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 N4BP2L2Q92802 583 aaPredicted RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 CDCA5Q96FF9 252 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 FAXDC2Q96IV6 333 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 CFAP57Q96MR6 1250 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 NT5C1BQ96P26 610 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 ECT2Q9H8V3 914 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 MRPL47Q9HD33 250 aaKnown RBP6.56□□□□□ -1.36
VCAM1-201ENST00000294728 CYLDQ9NQC7 956 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 NINJ2Q9NZG7 142 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 KLHL14Q9P2G3 628 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 AGAP1Q9UPQ3 857 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 PCDHB2Q9Y5E7 798 aa6.56□□□□□ -1.36
VCAM1-201ENST00000294728 FAM47DPA6NHR8 397 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 SPOPO43791 374 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 EGFRP00533 1210 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 ICAM1P05362 532 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 ATF2P15336 505 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 TAC1P20366 129 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 MSH2P43246 934 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 MARCKSL1P49006 195 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 TAP1Q03518 808 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 C1QBPQ07021 282 aaKnown RBP6.55□□□□□ -1.36
VCAM1-201ENST00000294728 MESDQ14696 234 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 MORF4L2Q15014 288 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 PDK4Q16654 411 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 BRDTQ58F21 947 aaPredicted RBP6.55□□□□□ -1.36
VCAM1-201ENST00000294728 PLEKHA7Q6IQ23 1121 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 DLK2Q6UY11 383 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 MON1BQ7L1V2 547 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 SAMD7Q7Z3H4 446 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 HAUS6Q7Z4H7 955 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 ZFPM1Q8IX07 1006 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 MTMR14Q8NCE2 650 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 PLEKHO2Q8TD55 490 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 FBF1Q8TES7 1133 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 TCP11Q8WWU5 503 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 APBB2Q92870 758 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 AGO4Q9HCK5 861 aaKnown RBP6.55□□□□□ -1.36
VCAM1-201ENST00000294728 ABCF3Q9NUQ8 709 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 SLC5A4Q9NY91 659 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 CORO1CQ9ULV4 474 aaPredicted RBP6.55□□□□□ -1.36
VCAM1-201ENST00000294728 SUFUQ9UMX1 484 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 USH1CQ9Y6N9 552 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 SCINQ9Y6U3 715 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 UMODL1Q5DID0 1318 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 MYPNQ86TC9 1320 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 TCP11X1B4DZS4 312 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 ANKRD63C9JTQ0 380 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 POLGP54098 1239 aaPredicted RBP6.55□□□□□ -1.36
VCAM1-201ENST00000294728 DLG4P78352 724 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 LACTBP83111 547 aaPredicted RBP6.55□□□□□ -1.36
VCAM1-201ENST00000294728 ZKSCAN8Q15776 578 aaPredicted RBP6.55□□□□□ -1.36
VCAM1-201ENST00000294728 ARHGAP44Q17R89 818 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 PCGF5Q86SE9 256 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 TRABD2AQ86V40 505 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 RHOT1Q8IXI2 618 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 NIPA2Q8N8Q9 360 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 ZNF296Q8WUU4 475 aaPredicted RBP6.55□□□□□ -1.36
VCAM1-201ENST00000294728 ALKBH8Q96BT7 664 aaKnown RBP6.55□□□□□ -1.36
VCAM1-201ENST00000294728 ZNF653Q96CK0 615 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 DHRS4Q9BTZ2 278 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 TRIM31Q9BZY9 425 aa6.55□□□□□ -1.36
VCAM1-201ENST00000294728 RAB20Q9NX57 234 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms