RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 ALG13Q9NP73 1137 aaKnown RBP16.62■□□□□ 0.25
NCK1-201ENST00000288986 SPG21Q9NZD8 308 aa16.62■□□□□ 0.25
NCK1-201ENST00000288986 TUBGCP4Q9UGJ1 667 aa16.62■□□□□ 0.25
NCK1-201ENST00000288986 DERAQ9Y315 318 aa16.62■□□□□ 0.25
NCK1-201ENST00000288986 C2CD2Q9Y426 696 aa16.62■□□□□ 0.25
NCK1-201ENST00000288986 TRIP11Q15643 1979 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 CARNS1A5YM72 827 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 C5orf67F2Z3F1 127 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 ZNF500O60304 480 aaPredicted RBP16.61■□□□□ 0.25
NCK1-201ENST00000288986 FGF18O76093 207 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 TPM2P07951 284 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 PRKCSHP14314 528 aaPredicted RBP16.61■□□□□ 0.25
NCK1-201ENST00000288986 TNNI1P19237 187 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 MSNP26038 577 aaKnown RBP16.61■□□□□ 0.25
NCK1-201ENST00000288986 PPM1AP35813 382 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 UBXN1Q04323 297 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 LMBRD2Q68DH5 695 aaPredicted RBP16.61■□□□□ 0.25
NCK1-201ENST00000288986 GPR153Q6NV75 609 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 CREBRFQ8IUR6 639 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 TRIM59Q8IWR1 403 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 TC2NQ8N9U0 490 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 BEST2Q8NFU1 509 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 KIAA1524Q8TCG1 905 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 TMEM169Q96HH4 297 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 POP1Q99575 1024 aaKnown RBP16.61■□□□□ 0.25
NCK1-201ENST00000288986 TDRD15B5MCY1 1934 aaKnown RBP16.61■□□□□ 0.25
NCK1-201ENST00000288986 MYO9BQ13459 2157 aa16.61■□□□□ 0.25
NCK1-201ENST00000288986 RFXAPO00287 272 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 SLC16A3O15427 465 aaKnown RBP16.6■□□□□ 0.25
NCK1-201ENST00000288986 KRT17Q04695 432 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 GPM6BQ13491 265 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 GRIN2CQ14957 1233 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 VWA3BQ502W6 1294 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 Q7L0L9 218 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 TMEM173Q86WV6 379 aaPredicted RBP16.6■□□□□ 0.25
NCK1-201ENST00000288986 NT5DC4Q86YG4 428 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 EFCAB13Q8IY85 973 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 FAM186BQ8IYM0 893 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 COLEC11Q9BWP8 271 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 PRDM12Q9H4Q4 367 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 PYCARDQ9ULZ3 195 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.6■□□□□ 0.25
NCK1-201ENST00000288986 EPOPA6NHQ4 379 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 F8W810 466 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 H3BNC9 293 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 B3GAT3O94766 335 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 TMEM191BP0C7N4 346 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 EPB41P11171 864 aaKnown RBP16.6■□□□□ 0.25
NCK1-201ENST00000288986 CYP3A5P20815 502 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 GUCY2FP51841 1108 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 TRIM14Q14142 442 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 PSMD6Q15008 389 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 UPP1Q16831 310 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 FRMD5Q7Z6J6 570 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 SLC39A11Q8N1S5 342 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 TMEM130Q8N3G9 435 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 DEFB123Q8N688 67 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 HASPINQ8TF76 798 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 DDX27Q96GQ7 796 aaKnown RBP16.6■□□□□ 0.25
NCK1-201ENST00000288986 IGSF21Q96ID5 467 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 UROC1Q96N76 676 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 NDST4Q9H3R1 872 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 RRAGDQ9NQL2 400 aaPredicted RBP16.6■□□□□ 0.25
NCK1-201ENST00000288986 TRANK1O15050 2925 aa16.6■□□□□ 0.25
NCK1-201ENST00000288986 EYSQ5T1H1 3165 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 PODXLO00592 558 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 TADA2AO75478 443 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 GYPCP04921 128 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 ITGB1P05556 798 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 KRT13P13646 458 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 RPL9P32969 192 aaKnown RBP16.59■□□□□ 0.25
NCK1-201ENST00000288986 INTS8Q75QN2 995 aaKnown RBP16.59■□□□□ 0.25
NCK1-201ENST00000288986 USP37Q86T82 979 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 PARD3BQ8TEW8 1205 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 GDPD5Q8WTR4 605 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 BORCS6Q96GS4 357 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 ANKRD36BP1Q96IX9 119 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 FAM84AQ96KN4 292 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 MKNK1Q9BUB5 465 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 DPP3Q9NY33 737 aa16.59■□□□□ 0.25
NCK1-201ENST00000288986 PUF60Q9UHX1 559 aaKnown RBP16.59■□□□□ 0.25
NCK1-201ENST00000288986 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.59■□□□□ 0.25
NCK1-201ENST00000288986 MAPK13O15264 365 aa16.58■□□□□ 0.25
NCK1-201ENST00000288986 CSPG5O95196 566 aa16.58■□□□□ 0.25
NCK1-201ENST00000288986 DUOXA2Q1HG44 320 aa16.58■□□□□ 0.25
NCK1-201ENST00000288986 CCDC40Q4G0X9 1142 aa16.58■□□□□ 0.25
NCK1-201ENST00000288986 DCLRE1AQ6PJP8 1040 aa16.58■□□□□ 0.25
NCK1-201ENST00000288986 TMEM139Q8IV31 216 aa16.58■□□□□ 0.25
NCK1-201ENST00000288986 WDR49Q8IV35 697 aa16.58■□□□□ 0.25
NCK1-201ENST00000288986 MTMR12Q9C0I1 747 aa16.58■□□□□ 0.25
NCK1-201ENST00000288986 ADAM28Q9UKQ2 775 aa16.58■□□□□ 0.25
NCK1-201ENST00000288986 KIF4AO95239 1232 aa16.58■□□□□ 0.24
NCK1-201ENST00000288986 VAMP7P51809 220 aa16.58■□□□□ 0.24
NCK1-201ENST00000288986 DLG4P78352 724 aa16.58■□□□□ 0.24
NCK1-201ENST00000288986 PLCB3Q01970 1234 aa16.58■□□□□ 0.24
NCK1-201ENST00000288986 FIGNQ5HY92 759 aa16.58■□□□□ 0.24
NCK1-201ENST00000288986 CCDC112Q8NEF3 446 aa16.58■□□□□ 0.24
NCK1-201ENST00000288986 OR5B17Q8NGF7 314 aa16.58■□□□□ 0.24
NCK1-201ENST00000288986 SPPL3Q8TCT6 385 aa16.58■□□□□ 0.24
NCK1-201ENST00000288986 PLEKHO2Q8TD55 490 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms