RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 TLE6Q9H808 572 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 GOLGA2P5Q9HBQ8 144 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 DMAC2Q9NW81 257 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 STK39Q9UEW8 545 aa9.99□□□□□ -0.81
HMGN1-201ENST00000288344 PRG3Q9Y2Y8 225 aaPredicted RBP9.99□□□□□ -0.81
HMGN1-201ENST00000288344 SCN1AP35498 2009 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 ANO9A1A5B4 782 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 PIRO00625 290 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 HNRNPDLO14979 420 aaKnown RBP9.98□□□□□ -0.81
HMGN1-201ENST00000288344 MYL1P05976 194 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 CXCL8P10145 99 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 IDEP14735 1019 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 GARTP22102 1010 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 RPL9P32969 192 aaKnown RBP9.98□□□□□ -0.81
HMGN1-201ENST00000288344 SYKP43405 635 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 AFMP43652 599 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 ACOT2P49753 483 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 LIG4P49917 911 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 SMC1AQ14683 1233 aaKnown RBP9.98□□□□□ -0.81
HMGN1-201ENST00000288344 KYAT1Q16773 422 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 TJAP1Q5JTD0 557 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 RTP2Q5QGT7 225 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 SWT1Q5T5J6 900 aaKnown RBP9.98□□□□□ -0.81
HMGN1-201ENST00000288344 SPATA1Q5VX52 437 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 PLPP4Q5VZY2 271 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 FUT10Q6P4F1 479 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 RSPO2Q6UXX9 243 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-201ENST00000288344 TMC7Q7Z402 723 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 RBM23Q86U06 439 aaKnown RBP9.98□□□□□ -0.81
HMGN1-201ENST00000288344 HOMEZQ8IX15 550 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 C12orf56Q8IXR9 622 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 ELOA2Q8IYF1 753 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-201ENST00000288344 TMEM87AQ8NBN3 555 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 SMRP1Q8NCR6 262 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 DOCK6Q96HP0 2047 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 FAM193BQ96PV7 902 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-201ENST00000288344 ACCSQ96QU6 501 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 CLSTN3Q9BQT9 956 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 CBWD1Q9BRT8 395 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 TCHPQ9BT92 498 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 KCTD10Q9H3F6 313 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 ZHX3Q9H4I2 956 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 CD320Q9NPF0 282 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 FNIP2Q9P278 1114 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 AGO2Q9UKV8 859 aaKnown RBP9.98□□□□□ -0.81
HMGN1-201ENST00000288344 HCFC2Q9Y5Z7 792 aa9.98□□□□□ -0.81
HMGN1-201ENST00000288344 CASTOR2A6NHX0 329 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 H3BQ06 376 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-201ENST00000288344 TEX28O15482 410 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 ADAM12O43184 909 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 MBTPS2O43462 519 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 RHOBTB3O94955 611 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 GCNT3O95395 438 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 KCNA5P22460 613 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 CLCN4P51793 760 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 POSTNQ15063 836 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 SMAD2Q15796 467 aaKnown RBP9.97□□□□□ -0.81
HMGN1-201ENST00000288344 KMT5BQ4FZB7 885 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 FAM26FQ5R3K3 315 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 APBB1IPQ7Z5R6 666 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-201ENST00000288344 EFCAB13Q8IY85 973 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 FSIP1Q8NA03 581 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 MICAL1Q8TDZ2 1067 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 PIK3R5Q8WYR1 880 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 B3GALT6Q96L58 329 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 UROC1Q96N76 676 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 MSTO1Q9BUK6 570 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 ASB7Q9H672 318 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 TMEM206Q9H813 350 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 TOPORSQ9NS56 1045 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-201ENST00000288344 SLC38A7Q9NVC3 462 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 CLDND1Q9NY35 253 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 ANKFY1Q9P2R3 1169 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 TUBGCP4Q9UGJ1 667 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 DERAQ9Y315 318 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 PLXNA3P51805 1871 aa9.97□□□□□ -0.81
HMGN1-201ENST00000288344 M0QZQ0 153 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 GADD45BO75293 160 aaPredicted RBP9.96□□□□□ -0.82
HMGN1-201ENST00000288344 B3GAT3O94766 335 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 SNRPFP62306 86 aaKnown RBP9.96□□□□□ -0.82
HMGN1-201ENST00000288344 ASIC1P78348 528 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 SPAG1Q07617 926 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 PSMD2Q13200 908 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 KCNB1Q14721 858 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 USP41Q3LFD5 358 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 ANKRD54Q6NXT1 300 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 LIMS2Q7Z4I7 341 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 LAPTM4BQ86VI4 370 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 CD302Q8IX05 232 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 RDH13Q8NBN7 331 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 TIGD1Q96MW7 591 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 RHOBTB2Q9BYZ6 727 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 IGFLR1Q9H665 355 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 AGPAT3Q9NRZ7 376 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 C2CD2Q9Y426 696 aa9.96□□□□□ -0.82
HMGN1-201ENST00000288344 NOTCH4Q99466 2003 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 PODXLO00592 558 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 PPEF2O14830 753 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 EXTL3O43909 919 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 TADA2AO75478 443 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms