RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 MTFR1Q15390 333 aa22.49■■□□□ 1.19
YBX3-202ENST00000279550 RPS6KA1Q15418 735 aa22.49■■□□□ 1.19
YBX3-202ENST00000279550 KIZQ2M2Z5 673 aa22.49■■□□□ 1.19
YBX3-202ENST00000279550 CCDC181Q5TID7 509 aa22.49■■□□□ 1.19
YBX3-202ENST00000279550 EEF1DP3Q658K8 133 aa22.49■■□□□ 1.19
YBX3-202ENST00000279550 TAF2Q6P1X5 1199 aa22.49■■□□□ 1.19
YBX3-202ENST00000279550 ARRDC4Q8NCT1 418 aa22.49■■□□□ 1.19
YBX3-202ENST00000279550 DDX1Q92499 740 aaKnown RBP22.49■■□□□ 1.19
YBX3-202ENST00000279550 TCHPQ9BT92 498 aa22.49■■□□□ 1.19
YBX3-202ENST00000279550 ACKR2O00590 384 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 OGTO15294 1046 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 BUB1BO60566 1050 aaPredicted RBP22.48■■□□□ 1.19
YBX3-202ENST00000279550 GPR32O75388 356 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 KRT5P13647 590 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 PROZP22891 400 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 TMEM62Q0P6H9 643 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 GLT1D1Q96MS3 346 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 ADAMTS10Q9H324 1103 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 PTPRHQ9HD43 1115 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 UMODL1Q5DID0 1318 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 CSDE1O75534 798 aaKnown RBP22.48■■□□□ 1.19
YBX3-202ENST00000279550 SASH3O75995 380 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 MYCP01106 439 aaPredicted RBP22.48■■□□□ 1.19
YBX3-202ENST00000279550 CDR2Q01850 454 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 ITGA7Q13683 1181 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 FAM187BQ17R55 369 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 WDR44Q5JSH3 913 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 TSHZ1Q6ZSZ6 1077 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 ENOSF1Q7L5Y1 443 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 CTU1Q7Z7A3 348 aaKnown RBP22.48■■□□□ 1.19
YBX3-202ENST00000279550 NT5DC3Q86UY8 548 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 CDR2LQ86X02 465 aaPredicted RBP22.48■■□□□ 1.19
YBX3-202ENST00000279550 ABCB6Q9NP58 842 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 PRMT7Q9NVM4 692 aaPredicted RBP22.48■■□□□ 1.19
YBX3-202ENST00000279550 OGFRQ9NZT2 677 aa22.48■■□□□ 1.19
YBX3-202ENST00000279550 RTN2O75298 545 aa22.47■■□□□ 1.19
YBX3-202ENST00000279550 PAFAH1B1P43034 410 aa22.47■■□□□ 1.19
YBX3-202ENST00000279550 LONRF2Q1L5Z9 754 aa22.47■■□□□ 1.19
YBX3-202ENST00000279550 ATF7IP2Q5U623 682 aa22.47■■□□□ 1.19
YBX3-202ENST00000279550 WDR93Q6P2C0 686 aa22.47■■□□□ 1.19
YBX3-202ENST00000279550 MPZL3Q6UWV2 235 aa22.47■■□□□ 1.19
YBX3-202ENST00000279550 NME8Q8N427 588 aa22.47■■□□□ 1.19
YBX3-202ENST00000279550 TAF4BQ92750 862 aa22.47■■□□□ 1.19
YBX3-202ENST00000279550 ARFGAP3Q9NP61 516 aa22.47■■□□□ 1.19
YBX3-202ENST00000279550 RBM12Q9NTZ6 932 aaKnown RBP22.47■■□□□ 1.19
YBX3-202ENST00000279550 CPSF3Q9UKF6 684 aaKnown RBP22.47■■□□□ 1.19
YBX3-202ENST00000279550 GINS2Q9Y248 185 aa22.47■■□□□ 1.19
YBX3-202ENST00000279550 TRIP12Q14669 1992 aaPredicted RBP22.46■■□□□ 1.19
YBX3-202ENST00000279550 KCNK3O14649 394 aa22.46■■□□□ 1.19
YBX3-202ENST00000279550 CCL5P13501 91 aa22.46■■□□□ 1.19
YBX3-202ENST00000279550 ACO1P21399 889 aaKnown RBP22.46■■□□□ 1.19
YBX3-202ENST00000279550 PDE6CP51160 858 aa22.46■■□□□ 1.19
YBX3-202ENST00000279550 CFAP221Q4G0U5 840 aa22.46■■□□□ 1.19
YBX3-202ENST00000279550 PEX26Q7Z412 305 aa22.46■■□□□ 1.19
YBX3-202ENST00000279550 DAAM2Q86T65 1068 aa22.46■■□□□ 1.19
YBX3-202ENST00000279550 DEFB118Q96PH6 123 aa22.46■■□□□ 1.19
YBX3-202ENST00000279550 RNF208Q9H0X6 261 aa22.46■■□□□ 1.19
YBX3-202ENST00000279550 NUB1Q9Y5A7 615 aa22.46■■□□□ 1.19
YBX3-202ENST00000279550 A0A1W2PQ45 241 aaPredicted RBP22.45■■□□□ 1.19
YBX3-202ENST00000279550 A0A1W2PQY0 241 aa22.45■■□□□ 1.19
YBX3-202ENST00000279550 KBTBD13C9JR72 458 aa22.45■■□□□ 1.19
YBX3-202ENST00000279550 LBX1P52954 281 aa22.45■■□□□ 1.19
YBX3-202ENST00000279550 MRPS25P82663 173 aaKnown RBP22.45■■□□□ 1.19
YBX3-202ENST00000279550 CBX1P83916 185 aa22.45■■□□□ 1.19
YBX3-202ENST00000279550 AMHR2Q16671 573 aa22.45■■□□□ 1.19
YBX3-202ENST00000279550 BEND6Q5SZJ8 279 aaPredicted RBP22.45■■□□□ 1.19
YBX3-202ENST00000279550 SERINC5Q86VE9 423 aa22.45■■□□□ 1.19
YBX3-202ENST00000279550 HNRNPLLQ8WVV9 542 aaKnown RBP22.45■■□□□ 1.19
YBX3-202ENST00000279550 GCOM2Q9BZD3 368 aaPredicted RBP22.45■■□□□ 1.19
YBX3-202ENST00000279550 CDHR5Q9HBB8 845 aa22.45■■□□□ 1.19
YBX3-202ENST00000279550 CHORDC1Q9UHD1 332 aaPredicted RBP22.45■■□□□ 1.19
YBX3-202ENST00000279550 TARSL2A2RTX5 802 aaKnown RBP22.45■■□□□ 1.18
YBX3-202ENST00000279550 ATMINO43313 823 aaPredicted RBP22.45■■□□□ 1.18
YBX3-202ENST00000279550 ZMYND10O75800 440 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 CLTAP09496 248 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 GZMAP12544 262 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 CUL2Q13617 745 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 ZNF568Q3ZCX4 644 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 FBXO46Q6PJ61 603 aaPredicted RBP22.45■■□□□ 1.18
YBX3-202ENST00000279550 WDR49Q8IV35 697 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 THNSL1Q8IYQ7 743 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 SYCE1Q8N0S2 351 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 CEP120Q8N960 986 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 HDAC7Q8WUI4 952 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 FAM212AQ96EL1 285 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 OSMRQ99650 979 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 LRRC1Q9BTT6 524 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 FUT8Q9BYC5 575 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 CDT1Q9H211 546 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 RNF14Q9UBS8 474 aa22.45■■□□□ 1.18
YBX3-202ENST00000279550 DNM1LO00429 736 aa22.44■■□□□ 1.18
YBX3-202ENST00000279550 PHACTR2O75167 634 aa22.44■■□□□ 1.18
YBX3-202ENST00000279550 RNASE9P60153 205 aaKnown RBP22.44■■□□□ 1.18
YBX3-202ENST00000279550 GPC5P78333 572 aa22.44■■□□□ 1.18
YBX3-202ENST00000279550 PTPN11Q06124 597 aaPredicted RBP22.44■■□□□ 1.18
YBX3-202ENST00000279550 NCOA4Q13772 614 aa22.44■■□□□ 1.18
YBX3-202ENST00000279550 TCEAL1Q15170 157 aa22.44■■□□□ 1.18
YBX3-202ENST00000279550 PTGISQ16647 500 aa22.44■■□□□ 1.18
YBX3-202ENST00000279550 HES6Q96HZ4 224 aa22.44■■□□□ 1.18
YBX3-202ENST00000279550 FAM81BQ96LP2 452 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms