RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 SLMAPQ14BN4 828 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 OR6B2Q6IFH4 312 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 RHOT1Q8IXI2 618 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 EFCAB13Q8IY85 973 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 RPF1Q9H9Y2 349 aaKnown RBP12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 SAE1Q9UBE0 346 aaPredicted RBP12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 LDHAP00338 332 aaKnown RBP12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 ZSCAN5DPP0CG00 497 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 NCKAP1LP55160 1127 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 BASP1P80723 227 aaKnown RBP12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 NEDD9Q14511 834 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 NIPA1Q7RTP0 329 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 CCDC33Q8N5R6 958 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 TIPINQ9BVW5 301 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 MRPL4Q9BYD3 311 aaKnown RBP12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 KIAA1586Q9HCI6 787 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 CTNNAL1Q9UBT7 734 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 STK38LQ9Y2H1 464 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 NHSQ6T4R5 1651 aa12.6□□□□□ -0.39
SLC13A3-201ENST00000279027 KCNA2P16389 499 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 UBA1P22314 1058 aaKnown RBP12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 GPC3P51654 580 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 EIF3BP55884 814 aaKnown RBP12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 PSMC1P62191 440 aaKnown RBP12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 VGLL4Q14135 290 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 DUOXA2Q1HG44 320 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 P3H1Q32P28 736 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 BBS9Q3SYG4 887 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 ZNF667Q5HYK9 610 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 TMEM35BQ8NCS4 154 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 MAIP1Q8WWC4 291 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 CLMNQ96JQ2 1002 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 TEPSINQ96N21 525 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 TRIM6Q9C030 488 aaPredicted RBP12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 PABPC3Q9H361 631 aaKnown RBP12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 HOMER3Q9NSC5 361 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 BAIAP2L1Q9UHR4 511 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 NUB1Q9Y5A7 615 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 MAFGO15525 162 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 FDX1P10109 184 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 KCNA3P22001 575 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 RGS7P49802 495 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 C1orf220Q5T0J3 134 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 C6orf118Q5T5N4 469 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 SLC39A4Q6P5W5 647 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 CTAGE3PQ8IX95 158 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 LMO3Q8TAP4 145 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 UBA3Q8TBC4 463 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 SYNPO2Q9UMS6 1093 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 EXOC1LA0A1B0GW35 172 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 BTNL10A8MVZ5 291 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 KIAA0391O15091 583 aaKnown RBP12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 CLTAP09496 248 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 RPS12P25398 132 aaKnown RBP12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 RPL7AP62424 266 aaKnown RBP12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 ATP11AP98196 1134 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 MYBPC2Q14324 1141 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 TRIM11Q96F44 468 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 RUNDC3BQ96NL0 473 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 NGRNQ9NPE2 291 aaKnown RBP12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 KCNG1Q9UIX4 513 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 STXBP5LQ9Y2K9 1186 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 NCANO14594 1321 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 IRF6O14896 467 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 ETS1P14921 441 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 BRAFP15056 766 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 ARSEP51690 589 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 CATSPERGQ6ZRH7 1159 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 ZC3H18Q86VM9 953 aaKnown RBP12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 TMEM130Q8N3G9 435 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 CCDC197Q8NCU1 140 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 NLGN2Q8NFZ4 835 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 TMC2Q8TDI7 906 aa12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 CDC42EP4Q9H3Q1 356 aaKnown RBP12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 ZNF214Q9UL59 606 aaPredicted RBP12.59□□□□□ -0.39
SLC13A3-201ENST00000279027 SCN9AQ15858 1988 aa12.58□□□□□ -0.39
SLC13A3-201ENST00000279027 H7C0C1 242 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 PLA2G6O60733 806 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 CST3P01034 146 aaPredicted RBP12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 GARTP22102 1010 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 ATP5OP48047 213 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 GTF2A1P52655 376 aaPredicted RBP12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 EFCAB12Q6NXP0 572 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 LRIG3Q6UXM1 1119 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 GPATCH11Q8N954 259 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 KCTD6Q8NC69 237 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 TCP11Q8WWU5 503 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 PIK3R5Q8WYR1 880 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 ZNF516Q92618 1163 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 RPS6KC1Q96S38 1066 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 LRRC4CQ9HCJ2 640 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 POLIQ9UNA4 740 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 R3HDM2Q9Y2K5 976 aaKnown RBP12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 RNF8O76064 485 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 IREB2P48200 963 aaKnown RBP12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 HIRAP54198 1017 aaPredicted RBP12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 CORO7P57737 925 aa12.58□□□□□ -0.4
SLC13A3-201ENST00000279027 ADCY2Q08462 1091 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms