RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 HIC2Q96JB3 615 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 AGBL1Q96MI9 1066 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 LRRC37BQ96QE4 947 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 MXRA8Q9BRK3 442 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 PITPNM3Q9BZ71 974 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 MAF1Q9H063 256 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 DCLRE1BQ9H816 532 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 OSGEPQ9NPF4 335 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 KCND2Q9NZV8 630 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 SUCLA2Q9P2R7 463 aaPredicted RBP8.08□□□□□ -1.12
TRIM6-201ENST00000278302 STOML1Q9UBI4 398 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 USP20Q9Y2K6 914 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 BRWD3Q6RI45 1802 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 SMCHD1A6NHR9 2005 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 RBM47A0AV96 593 aaKnown RBP8.08□□□□□ -1.12
TRIM6-201ENST00000278302 MAGEA13PA6NCF6 341 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 RIPK2O43353 540 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 LRRN2O75325 713 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 SETDB1Q15047 1291 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 CMPK2Q5EBM0 449 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 JAMLQ86YT9 394 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 CPXCR1Q8N123 301 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 AGGF1Q8N302 714 aaeCLIP8.08□□□□□ -1.12
TRIM6-201ENST00000278302 LARGE2Q8N3Y3 721 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 AZIN2Q96A70 460 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 TUBGCP5Q96RT8 1024 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 TMEM39BQ9GZU3 492 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 SLCO1B3Q9NPD5 702 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 LARSQ9P2J5 1176 aaKnown RBP8.08□□□□□ -1.12
TRIM6-201ENST00000278302 APEX2Q9UBZ4 518 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 PFASO15067 1338 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 EP400Q96L91 3159 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 PDLIM1O00151 329 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 TBX10O75333 385 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 BCRP11274 1271 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 BRAFP15056 766 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 SKIV2L2P42285 1042 aaKnown RBP8.08□□□□□ -1.12
TRIM6-201ENST00000278302 RPL21P46778 160 aaKnown RBP8.08□□□□□ -1.12
TRIM6-201ENST00000278302 NPEPPSP55786 919 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 BFSP1Q12934 665 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 DNAJC3Q13217 504 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 LLGL1Q15334 1064 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 DPY19L2Q6NUT2 758 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 ZNF365Q70YC5 407 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 NT5DC3Q86UY8 548 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 CKAP2Q8WWK9 683 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 FIZ1Q96SL8 496 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 UBE2TQ9NPD8 197 aaPredicted RBP8.08□□□□□ -1.12
TRIM6-201ENST00000278302 DMAC2Q9NW81 257 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 TCEAL9Q9UHQ7 104 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 BCS1LQ9Y276 419 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 PTPN22Q9Y2R2 807 aa8.08□□□□□ -1.12
TRIM6-201ENST00000278302 KIAA0391O15091 583 aaKnown RBP8.07□□□□□ -1.12
TRIM6-201ENST00000278302 P4HBP07237 508 aaKnown RBP8.07□□□□□ -1.12
TRIM6-201ENST00000278302 LYNP07948 512 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 TMEM253P0C7T8 217 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 FOXN2P32314 431 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 DCAF12L1Q5VU92 463 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 RNF43Q68DV7 783 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 LRRC74BQ6ZQY2 392 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 SLC30A5Q8TAD4 765 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 MIPOL1Q8TD10 442 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 C7orf43Q8WVR3 580 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 NMD3Q96D46 503 aaKnown RBP8.07□□□□□ -1.12
TRIM6-201ENST00000278302 DDX27Q96GQ7 796 aaKnown RBP8.07□□□□□ -1.12
TRIM6-201ENST00000278302 NAP1L3Q99457 506 aaPredicted RBP8.07□□□□□ -1.12
TRIM6-201ENST00000278302 RIT2Q99578 217 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 GLIS2Q9BZE0 524 aaPredicted RBP8.07□□□□□ -1.12
TRIM6-201ENST00000278302 CTDP1Q9Y5B0 961 aaPredicted RBP8.07□□□□□ -1.12
TRIM6-201ENST00000278302 FOXN3O00409 490 aaPredicted RBP8.07□□□□□ -1.12
TRIM6-201ENST00000278302 SUPT3HO75486 399 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 HNRNPCP07910 306 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRIM6-201ENST00000278302 ALAS1P13196 640 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 EIF4BP23588 611 aaKnown RBP8.07□□□□□ -1.12
TRIM6-201ENST00000278302 CAP2P40123 477 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 POLGP54098 1239 aaPredicted RBP8.07□□□□□ -1.12
TRIM6-201ENST00000278302 KPNB1Q14974 876 aaKnown RBP8.07□□□□□ -1.12
TRIM6-201ENST00000278302 ACSBG2Q5FVE4 666 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 SLFN11Q7Z7L1 901 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 CDAN1Q8IWY9 1227 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 RFFLQ8WZ73 363 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 ACCSQ96QU6 501 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 SH2D3AQ9BRG2 576 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 TMEM206Q9H813 350 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRIM6-201ENST00000278302 KCNH7Q9NS40 1196 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 HOMER2Q9NSB8 354 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 GRHL1Q9NZI5 618 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 TMOD4Q9NZQ9 345 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 TMCO1Q9UM00 188 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 NENFQ9UMX5 172 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 STXBP5LQ9Y2K9 1186 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 WASF2Q9Y6W5 498 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 EMSYQ7Z589 1322 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 ANKRD63C9JTQ0 380 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 MAGEB3O15480 346 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 ITGB5P18084 799 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 VAMP7P51809 220 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 PTENP60484 403 aa8.07□□□□□ -1.12
TRIM6-201ENST00000278302 MTFR1Q15390 333 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms