RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 RAB6BQ9NRW1 208 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 MOSPD1Q9UJG1 213 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 FARP1Q9Y4F1 1045 aaPredicted RBP11.88□□□□□ -0.51
USP6NL-201ENST00000277575 USH1CQ9Y6N9 552 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 A0A087X0T9 212 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 OPHN1O60890 802 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 FAM228BP0C875 321 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 OR1G1P47890 313 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 KRT33BQ14525 404 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 C4orf19Q8IY42 314 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 TRIM51Q9BSJ1 452 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 SLC13A1Q9BZW2 595 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 ZFATQ9P243 1243 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 NAGPAQ9UK23 515 aa11.88□□□□□ -0.51
USP6NL-201ENST00000277575 UBQLN1Q9UMX0 589 aaKnown RBP11.88□□□□□ -0.51
USP6NL-201ENST00000277575 PRG3Q9Y2Y8 225 aaPredicted RBP11.88□□□□□ -0.51
USP6NL-201ENST00000277575 GNL1P36915 607 aaPredicted RBP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 TAF6P49848 677 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 HERVK_113P62684 666 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 DEUP1Q05D60 604 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 FRA10AC1Q70Z53 315 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 RAPGEF5Q92565 580 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 ZNF512Q96ME7 567 aaPredicted RBP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 GBP5Q96PP8 586 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 TRAIPQ9BWF2 469 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 CHORDC1Q9UHD1 332 aaPredicted RBP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 GTF3C4Q9UKN8 822 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 SNX2O60749 519 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 PHF2O75151 1096 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 DCTN3O75935 186 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 BRD2P25440 801 aaKnown RBP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 ACADSBP45954 432 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 NSUN2Q08J23 767 aaKnown RBP eCLIP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 EARS2Q5JPH6 523 aaKnown RBP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 GLRA4Q5JXX5 417 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 MAP1SQ66K74 1059 aaPredicted RBP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 ZNF720Q7Z2F6 126 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 MIPOL1Q8TD10 442 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 ATP6V1G3Q96LB4 118 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 ACTR5Q9H9F9 607 aaPredicted RBP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 SUN2Q9UH99 717 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 APOBEC2Q9Y235 224 aaKnown RBP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 PLEKP08567 350 aaPredicted RBP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 TAL1P17542 331 aaPredicted RBP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 FGFR4P22455 802 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 PON1P27169 355 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 DSG3P32926 999 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 CUL2Q13617 745 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 DCAF6Q58WW2 860 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 SLC30A10Q6XR72 485 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 SYDE1Q6ZW31 735 aaPredicted RBP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 ZFPM1Q8IX07 1006 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 SCFD1Q8WVM8 642 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 SEMA6BQ9H3T3 888 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 KLK14Q9P0G3 267 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 C17orf102A2RUQ5 167 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 RBP3P10745 1247 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 GARTP22102 1010 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 PNPLA4P41247 253 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 SLC26A2P50443 739 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 STAT4Q14765 748 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 KIZQ2M2Z5 673 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 METTL7BQ6UX53 244 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 TADA2BQ86TJ2 420 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 DCP1BQ8IZD4 617 aaKnown RBP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 OPTNQ96CV9 577 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 C9orf72Q96LT7 481 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 RBM15Q96T37 977 aaKnown RBP eCLIP11.87□□□□□ -0.511e-6■■■□□ 19.2
USP6NL-201ENST00000277575 CYTH2Q99418 400 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 RBM12Q9NTZ6 932 aaKnown RBP11.87□□□□□ -0.51
USP6NL-201ENST00000277575 SMARCAL1Q9NZC9 954 aa11.87□□□□□ -0.51
USP6NL-201ENST00000277575 UBA6A0AVT1 1052 aaPredicted RBP11.86□□□□□ -0.51
USP6NL-201ENST00000277575 C3orf70A6NLC5 250 aaPredicted RBP11.86□□□□□ -0.51
USP6NL-201ENST00000277575 CXCL11O14625 94 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 CST8O60676 142 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 ZNF189O75820 626 aaPredicted RBP11.86□□□□□ -0.51
USP6NL-201ENST00000277575 HMBSP08397 361 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 TERF2Q15554 542 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 FKBP1CQ5VVH2 108 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 ANKMY2Q8IV38 441 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 PDZD8Q8NEN9 1154 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 FEZF2Q8TBJ5 459 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 HAUS8Q9BT25 410 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 AGO4Q9HCK5 861 aaKnown RBP11.86□□□□□ -0.51
USP6NL-201ENST00000277575 GTSE1Q9NYZ3 720 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 E5RI56 91 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 GNGT2O14610 69 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 FOXP2O15409 715 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 B3GAT3O94766 335 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 ITIH2P19823 946 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 PSMC6P62333 389 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 IL1RL1Q01638 556 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 BYSLQ13895 437 aaKnown RBP11.86□□□□□ -0.51
USP6NL-201ENST00000277575 P3H1Q32P28 736 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 SYCP2LQ5T4T6 812 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 KDELC2Q7Z4H8 507 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 VPS33BQ9H267 617 aa11.86□□□□□ -0.51
USP6NL-201ENST00000277575 DCTN4Q9UJW0 460 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms