RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ZNF236Q9UL36 1845 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 KRIT1O00522 736 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 CLSTN1O94985 981 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 CFHP08603 1231 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 CXCL8P10145 99 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 MYBL1P10243 752 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 PEX5P50542 639 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 INHBEP58166 350 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 CENPCQ03188 943 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 KYAT1Q16773 422 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 NAA35Q5VZE5 725 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 RGMBQ6NW40 437 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 ZNF410Q86VK4 478 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 UBL4BQ8N7F7 174 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 AENQ8WTP8 325 aaKnown RBP10.25□□□□□ -0.77
TRIM55-201ENST00000276573 NLRP7Q8WX94 980 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 ZNF606Q8WXB4 792 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 ALG3Q92685 438 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 CD101Q93033 1021 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 TRIM11Q96F44 468 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 BTBD6Q96KE9 485 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 AP1M1Q9BXS5 423 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 NIF3L1Q9GZT8 377 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 EPB41L5Q9HCM4 733 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 A0A1B0GUA9 196 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 MEFVO15553 781 aaPredicted RBP10.24□□□□□ -0.77
TRIM55-201ENST00000276573 THAP12O43422 761 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 RAD51CO43502 376 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 HEXIM1O94992 359 aaKnown RBP10.24□□□□□ -0.77
TRIM55-201ENST00000276573 ITGA4P13612 1032 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 CTNNA2P26232 953 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 NSFP46459 744 aaKnown RBP10.24□□□□□ -0.77
TRIM55-201ENST00000276573 NOMO3P69849 1222 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 SLC10A6Q3KNW5 377 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 SAPCD2Q86UD0 394 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 IFNL1Q8IU54 200 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 KRT35Q92764 455 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 KAT2BQ92831 832 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 VCPIP1Q96JH7 1222 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 RNPC3Q96LT9 517 aaKnown RBP10.24□□□□□ -0.77
TRIM55-201ENST00000276573 ZSWIM1Q9BR11 485 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 ASB7Q9H672 318 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 VIPAS39Q9H9C1 493 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 CISHQ9NSE2 258 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 SIX4Q9UIU6 781 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 GJD2Q9UKL4 321 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 PCDHA3Q9Y5H8 950 aa10.24□□□□□ -0.77
TRIM55-201ENST00000276573 SART1O43290 800 aaKnown RBP10.23□□□□□ -0.77
TRIM55-201ENST00000276573 TSPAN1O60635 241 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 FGGP02679 453 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 WEE2P0C1S8 567 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 CYP2B6P20813 491 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 RRM1P23921 792 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 CYP2C19P33261 490 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 TNNT3P45378 269 aaPredicted RBP10.23□□□□□ -0.77
TRIM55-201ENST00000276573 CDC42EP1Q00587 391 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 GUCY2DQ02846 1103 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 ZNF211Q13398 564 aaPredicted RBP10.23□□□□□ -0.77
TRIM55-201ENST00000276573 CLUL1Q15846 466 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 CCL14Q16627 93 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 ZNF699Q32M78 642 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 OLFML2BQ68BL8 750 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 PPP1R2P3Q6NXS1 205 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 MON1BQ7L1V2 547 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 PHF13Q86YI8 300 aaPredicted RBP10.23□□□□□ -0.77
TRIM55-201ENST00000276573 GSPT2Q8IYD1 628 aaKnown RBP10.23□□□□□ -0.77
TRIM55-201ENST00000276573 NAP1L3Q99457 506 aaPredicted RBP10.23□□□□□ -0.77
TRIM55-201ENST00000276573 ADAMTS10Q9H324 1103 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 BHMG1C9JSJ3 638 aaPredicted RBP10.23□□□□□ -0.77
TRIM55-201ENST00000276573 SPOPO43791 374 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 ERLIN2O94905 339 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 F2P00734 622 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 NFICP08651 508 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 SLC10A3P09131 477 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 SMIM10L2AP0DMW4 78 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 SMIM10L2BP0DMW5 78 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 CD58P19256 250 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 SSTR3P32745 418 aaPredicted RBP10.23□□□□□ -0.77
TRIM55-201ENST00000276573 CTNNA1P35221 906 aaKnown RBP10.23□□□□□ -0.77
TRIM55-201ENST00000276573 YWHAEP62258 255 aaKnown RBP10.23□□□□□ -0.77
TRIM55-201ENST00000276573 PTP4A2Q12974 167 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 LIN9Q5TKA1 542 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 JADE1Q6IE81 842 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 PHLDB2Q86SQ0 1253 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 CPNE8Q86YQ8 564 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 PASD1Q8IV76 773 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 C1orf127Q8N9H9 656 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 FAXDC2Q96IV6 333 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 SCLT1Q96NL6 688 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 DDX47Q9H0S4 455 aaKnown RBP10.23□□□□□ -0.77
TRIM55-201ENST00000276573 SLITRK6Q9H5Y7 841 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 ZFYVE28Q9HCC9 887 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 ST7Q9NRC1 585 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 ADAM22Q9P0K1 906 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 ANAPC7Q9UJX3 599 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 Q9Y3F1 56 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 NR2E1Q9Y466 385 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 MROH7Q68CQ1 1323 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 NRCAMQ92823 1304 aa10.23□□□□□ -0.77
TRIM55-201ENST00000276573 ZSWIM8A7E2V4 1837 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms