RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 C19orf81C9J6K1 198 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 FMO5P49326 533 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 FMR1Q06787 632 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHPRH-201ENST00000275233 PTPRN2Q92932 1015 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 TMA16Q96EY4 203 aaKnown RBP12.48□□□□□ -0.41
SHPRH-201ENST00000275233 AGPAT5Q9NUQ2 364 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 CD274Q9NZQ7 290 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 PDXKO00764 312 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 BRD2P25440 801 aaKnown RBP12.48□□□□□ -0.41
SHPRH-201ENST00000275233 NT5C2P49902 561 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 NR1H3Q13133 447 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 RCOR2Q8IZ40 523 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 TAAR1Q96RJ0 339 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 DEFB129Q9H1M3 183 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 CDV3Q9UKY7 258 aaKnown RBP12.48□□□□□ -0.41
SHPRH-201ENST00000275233 ZNF609O15014 1411 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 UBE2Q2LH0YL09 131 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 STXBP3O00186 592 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 HIST1H2AGP0C0S8 130 aaPredicted RBP12.47□□□□□ -0.41
SHPRH-201ENST00000275233 HIST1H2ADP20671 130 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 THPOP40225 353 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 USP10Q14694 798 aaKnown RBP12.47□□□□□ -0.41
SHPRH-201ENST00000275233 KRT72Q14CN4 511 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 DGKDQ16760 1214 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 LPAR1Q92633 364 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 HIST1H2AHQ96KK5 128 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 CALR3Q96L12 384 aaKnown RBP12.47□□□□□ -0.41
SHPRH-201ENST00000275233 MED15Q96RN5 788 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 HIST1H2AJQ99878 128 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 H2AFJQ9BTM1 129 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 LRRC1Q9BTT6 524 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 NAGPAQ9UK23 515 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 ALKQ9UM73 1620 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 ALDH1A3P47895 512 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 SGSM1Q2NKQ1 1148 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 ATG4CQ96DT6 458 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 FAM167BQ9BTA0 163 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 TRIM9Q9C026 710 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 C20orf96Q9NUD7 363 aaPredicted RBP12.47□□□□□ -0.41
SHPRH-201ENST00000275233 PCMTD2Q9NV79 361 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 CLTCL1P53675 1640 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 CAMTA2O94983 1202 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 NCAM1P13591 858 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 YY1P25490 414 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 GTF2H1P32780 548 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 EZH2Q15910 746 aaKnown RBP12.47□□□□□ -0.41
SHPRH-201ENST00000275233 C16orf87Q6PH81 154 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 GLB1LQ6UWU2 654 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 SGMS1Q86VZ5 419 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 STKLD1Q8NE28 680 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 VCPKMTQ9H867 229 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 FHOD1Q9Y613 1164 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 TCP11X1B4DZS4 312 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 TCF7P36402 384 aaPredicted RBP12.47□□□□□ -0.41
SHPRH-201ENST00000275233 RCAN1P53805 252 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 ZRANB3Q5FWF4 1079 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 AARS2Q5JTZ9 985 aaKnown RBP12.47□□□□□ -0.41
SHPRH-201ENST00000275233 IGDCC4Q8TDY8 1250 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 MTBPQ96DY7 904 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 FOPNLQ96NB1 174 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 MOV10L1Q9BXT6 1211 aaKnown RBP12.47□□□□□ -0.41
SHPRH-201ENST00000275233 EIF2AQ9BY44 585 aaKnown RBP12.47□□□□□ -0.41
SHPRH-201ENST00000275233 IRX2Q9BZI1 471 aaPredicted RBP12.47□□□□□ -0.41
SHPRH-201ENST00000275233 TRAF3IP3Q9Y228 551 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 FAM187AA6NFU0 413 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 HLA-DRAP01903 254 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 UBE3AQ05086 875 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 SV2CQ496J9 727 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 C16orf86Q6ZW13 317 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 PPP2R3CQ969Q6 453 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 TSSK1BQ9BXA7 367 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 TASP1Q9H6P5 420 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 TMEM161AQ9NX61 479 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 PCDHB8Q9UN66 801 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 SLC30A1Q9Y6M5 507 aa12.47□□□□□ -0.41
SHPRH-201ENST00000275233 ANO9A1A5B4 782 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 ITGB3P05106 788 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 GALCP54803 685 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 AP2B1P63010 937 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 GUCY1A3Q02108 690 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 SLC9A5Q14940 896 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 BTN2A2Q8WVV5 523 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 NPHS2Q9NP85 383 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 ADCY10Q96PN6 1610 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 NPEPPSP55786 919 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 HNRNPH2P55795 449 aaKnown RBP12.46□□□□□ -0.41
SHPRH-201ENST00000275233 NLRP14Q86W24 1093 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 HASPINQ8TF76 798 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 TET3O43151 1660 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 MYO1GB0I1T2 1018 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 EPB42P16452 691 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 DMTNQ08495 405 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 AP1ARQ63HQ0 302 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 PTRHD1Q6GMV3 140 aaKnown RBP12.46□□□□□ -0.41
SHPRH-201ENST00000275233 GPAT2Q6NUI2 795 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 NUDT12Q9BQG2 462 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 MXRA8Q9BRK3 442 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 TRABDQ9H4I3 376 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 CHMP2BQ9UQN3 213 aa12.46□□□□□ -0.41
SHPRH-201ENST00000275233 KLRK1P26718 216 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms