RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 MIPEPQ99797 713 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 NMRK1Q9NWW6 199 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.7□□□□□ -0.22
COL8A1-202ENST00000273342 NEU2Q9Y3R4 380 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 C2CD2Q9Y426 696 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 ADGRA3Q8IWK6 1321 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 XIRP1Q702N8 1843 aaKnown RBP13.7□□□□□ -0.22
COL8A1-202ENST00000273342 ATAD5Q96QE3 1844 aa13.7□□□□□ -0.22
COL8A1-202ENST00000273342 PLIN4Q96Q06 1357 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 MYH11P35749 1972 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 ZBED4O75132 1171 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 PSMD10O75832 226 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 KRT4P19013 534 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 PAPOLAP51003 745 aaKnown RBP13.69□□□□□ -0.22
COL8A1-202ENST00000273342 SOX10P56693 466 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 GAD2Q05329 585 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 KLC1Q07866 573 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 MOXD1Q6UVY6 613 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 C11orf70Q9BRQ4 267 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 FBXO6Q9NRD1 293 aaPredicted RBP13.69□□□□□ -0.22
COL8A1-202ENST00000273342 LRRC42Q9Y546 428 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 FOSP01100 380 aaPredicted RBP13.69□□□□□ -0.22
COL8A1-202ENST00000273342 TCF4P15884 667 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 ATP6V1C1P21283 382 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 GCAP28676 217 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 ECE1P42892 770 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 YARSP54577 528 aaKnown RBP13.69□□□□□ -0.22
COL8A1-202ENST00000273342 MFAP3P55082 362 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 CDR2Q01850 454 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 KPNB1Q14974 876 aaKnown RBP13.69□□□□□ -0.22
COL8A1-202ENST00000273342 MAPK6Q16659 721 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 TSNAXIP1Q2TAA8 658 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 MDH1BQ5I0G3 518 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 C12orf50Q8NA57 414 aaPredicted RBP13.69□□□□□ -0.22
COL8A1-202ENST00000273342 MAK16Q9BXY0 300 aaKnown RBP13.69□□□□□ -0.22
COL8A1-202ENST00000273342 ZC3H12CQ9C0D7 883 aaKnown RBP13.69□□□□□ -0.22
COL8A1-202ENST00000273342 LAMB2P55268 1798 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 A0A1B0GVG6 124 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 KIF3CO14782 793 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 NVLO15381 856 aaKnown RBP13.69□□□□□ -0.22
COL8A1-202ENST00000273342 GH2P01242 217 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 GZMAP12544 262 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 PECAM1P16284 738 aaPredicted RBP13.69□□□□□ -0.22
COL8A1-202ENST00000273342 ZBTB16Q05516 673 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 GPS1Q13098 491 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 MOGSQ13724 837 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 STAT4Q14765 748 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 ASAP3Q8TDY4 903 aa13.69□□□□□ -0.22
COL8A1-202ENST00000273342 CPSF2Q9P2I0 782 aaKnown RBP13.69□□□□□ -0.22
COL8A1-202ENST00000273342 MAST2Q6P0Q8 1798 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 EDF1O60869 148 aaKnown RBP13.68□□□□□ -0.22
COL8A1-202ENST00000273342 ADRA2BP18089 450 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 SNX30Q5VWJ9 437 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 ACAD10Q6JQN1 1059 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 GRAMD1AQ96CP6 724 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 TUFT1Q9NNX1 390 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 LARSQ9P2J5 1176 aaKnown RBP13.68□□□□□ -0.22
COL8A1-202ENST00000273342 SAE1Q9UBE0 346 aaPredicted RBP13.68□□□□□ -0.22
COL8A1-202ENST00000273342 USP21Q9UK80 565 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 DNPEPQ9ULA0 475 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 STARD13Q9Y3M8 1113 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 MROH7Q68CQ1 1323 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 ABCA3Q99758 1704 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 CAPN9O14815 690 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 DCTN3O75935 186 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 SNUPNO95149 360 aaKnown RBP13.68□□□□□ -0.22
COL8A1-202ENST00000273342 UBTFL6P0CB48 400 aaPredicted RBP13.68□□□□□ -0.22
COL8A1-202ENST00000273342 RBBP5Q15291 538 aaKnown RBP13.68□□□□□ -0.22
COL8A1-202ENST00000273342 C11orf91Q3C1V1 193 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 PPP1R15BQ5SWA1 713 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 MEX3CQ5U5Q3 659 aaKnown RBP13.68□□□□□ -0.22
COL8A1-202ENST00000273342 APOBEC3HQ6NTF7 200 aaKnown RBP13.68□□□□□ -0.22
COL8A1-202ENST00000273342 HAUS6Q7Z4H7 955 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 GRK7Q8WTQ7 553 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 C10orf82Q8WW14 230 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 ZNF75CPQ92670 426 aaPredicted RBP13.68□□□□□ -0.22
COL8A1-202ENST00000273342 CADM1Q9BY67 442 aaKnown RBP13.68□□□□□ -0.22
COL8A1-202ENST00000273342 OSBPL8Q9BZF1 889 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 ARL8BQ9NVJ2 186 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 ARMCX1Q9P291 453 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 UVRAGQ9P2Y5 699 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 PRR12Q9ULL5 1215 aa13.68□□□□□ -0.22
COL8A1-202ENST00000273342 ZCCHC18P0CG32 403 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 FDX1P10109 184 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 MARK3P27448 753 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 SSTR1P30872 391 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 SKIV2L2P42285 1042 aaKnown RBP13.67□□□□□ -0.22
COL8A1-202ENST00000273342 ARSEP51690 589 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 DYNLT1P63172 113 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 PDIA2Q13087 525 aaKnown RBP13.67□□□□□ -0.22
COL8A1-202ENST00000273342 ACVR2BQ13705 512 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 SLC15A2Q16348 729 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 SNRNP35Q16560 246 aaKnown RBP13.67□□□□□ -0.22
COL8A1-202ENST00000273342 PARP6Q2NL67 630 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 LRRC6Q86X45 466 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 CCDC89Q8N998 374 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 NRG4Q8WWG1 115 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 SCG3Q8WXD2 468 aaKnown RBP13.67□□□□□ -0.22
COL8A1-202ENST00000273342 MKL1Q969V6 931 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 HEY2Q9UBP5 337 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms