RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ZNHIT6Q9NWK9 470 aaKnown RBP26.57■■□□□ 1.84
SSBP4-201ENST00000270061 IPPQ9Y573 584 aa26.57■■□□□ 1.84
SSBP4-201ENST00000270061 ANKRD63C9JTQ0 380 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 NCK2O43639 380 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 KCNA5P22460 613 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 ADSSP30520 456 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 IRS1P35568 1242 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 PLCB3Q01970 1234 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 RNASELQ05823 741 aaKnown RBP26.56■■□□□ 1.84
SSBP4-201ENST00000270061 DNTTIP2Q5QJE6 756 aaKnown RBP26.56■■□□□ 1.84
SSBP4-201ENST00000270061 TOGARAM2Q6ZUX3 1019 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 REXO1L1PQ8IX06 675 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 SMG8Q8ND04 991 aaKnown RBP26.56■■□□□ 1.84
SSBP4-201ENST00000270061 URGCPQ8TCY9 931 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 MICAL1Q8TDZ2 1067 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 BAP1Q92560 729 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 LSM14BQ9BX40 385 aaKnown RBP26.56■■□□□ 1.84
SSBP4-201ENST00000270061 NUCKS1Q9H1E3 243 aaKnown RBP26.56■■□□□ 1.84
SSBP4-201ENST00000270061 FZD8Q9H461 694 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 PCIF1Q9H4Z3 704 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 PUF60Q9UHX1 559 aaKnown RBP26.56■■□□□ 1.84
SSBP4-201ENST00000270061 LZTS1Q9Y250 596 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 A0A1B0GUA9 196 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 GOLGA6L9A6NEM1 432 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 ZC3H11AO75152 810 aaKnown RBP eCLIP26.56■■□□□ 1.84
SSBP4-201ENST00000270061 ITGA4P13612 1032 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 GARTP22102 1010 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 KRT17Q04695 432 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 MAPK6Q16659 721 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 FAM187BQ17R55 369 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 EXOC3L4Q17RC7 722 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 DPY19L2P1Q6NXN4 242 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 GBP6Q6ZN66 633 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 EP400NLQ6ZTU2 488 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 UBN1Q9NPG3 1134 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 SPG21Q9NZD8 308 aa26.56■■□□□ 1.84
SSBP4-201ENST00000270061 BDP1A6H8Y1 2624 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 PIGRP01833 764 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 TUBB4AP04350 444 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 BMP1P13497 986 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 KRT13P13646 458 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 BCAR1P56945 870 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 HYAL1Q12794 435 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 MTF1Q14872 753 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 PTPN14Q15678 1187 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 SLC39A4Q6P5W5 647 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 SLC27A1Q6PCB7 646 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 C16orf45Q96MC5 204 aaPredicted RBP26.55■■□□□ 1.84
SSBP4-201ENST00000270061 FBXL18Q96ME1 805 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 CRACR2AQ9BSW2 395 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 CLDND1Q9NY35 253 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 ADGRG1Q9Y653 693 aa26.55■■□□□ 1.84
SSBP4-201ENST00000270061 CARNS1A5YM72 827 aa26.54■■□□□ 1.84
SSBP4-201ENST00000270061 KIF2AO00139 706 aaPredicted RBP26.54■■□□□ 1.84
SSBP4-201ENST00000270061 STRN3Q13033 797 aa26.54■■□□□ 1.84
SSBP4-201ENST00000270061 COL19A1Q14993 1142 aa26.54■■□□□ 1.84
SSBP4-201ENST00000270061 CDR2LQ86X02 465 aaPredicted RBP26.54■■□□□ 1.84
SSBP4-201ENST00000270061 HACE1Q8IYU2 909 aa26.54■■□□□ 1.84
SSBP4-201ENST00000270061 SYN2Q92777 582 aaPredicted RBP26.54■■□□□ 1.84
SSBP4-201ENST00000270061 CHP1Q99653 195 aa26.54■■□□□ 1.84
SSBP4-201ENST00000270061 GANQ9H2C0 597 aa26.54■■□□□ 1.84
SSBP4-201ENST00000270061 KANSL3Q9P2N6 904 aa26.54■■□□□ 1.84
SSBP4-201ENST00000270061 FBXL5Q9UKA1 691 aa26.54■■□□□ 1.84
SSBP4-201ENST00000270061 HES2Q9Y543 173 aa26.54■■□□□ 1.84
SSBP4-201ENST00000270061 C5orf42Q9H799 3197 aa26.54■■□□□ 1.84
SSBP4-201ENST00000270061 CCDC175P0C221 793 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 PON1P27169 355 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 FMO5P49326 533 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 ENPEPQ07075 957 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 CACNA2D4Q7Z3S7 1137 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 SLC39A11Q8N1S5 342 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 ADAMTS19Q8TE59 1207 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 IGFLR1Q9H665 355 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 NRDE2Q9H7Z3 1164 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 STYXL1Q9Y6J8 313 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 K7ERI5 159 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 PRKCBP05771 671 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 TNNT1P13805 278 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 EFNA5P52803 228 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 ERVFC1P60507 584 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 PRPF4BQ13523 1007 aaKnown RBP26.53■■□□□ 1.84
SSBP4-201ENST00000270061 TMEM132AQ24JP5 1023 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 PDE12Q6L8Q7 609 aaKnown RBP26.53■■□□□ 1.84
SSBP4-201ENST00000270061 PDXDC1Q6P996 788 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 CCDC113Q9H0I3 377 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 PCDHGC5Q9Y5F6 944 aa26.53■■□□□ 1.84
SSBP4-201ENST00000270061 NT5C1B-RDH14C9J2C7 533 aa26.52■■□□□ 1.84
SSBP4-201ENST00000270061 ACKR2O00590 384 aa26.52■■□□□ 1.84
SSBP4-201ENST00000270061 HNRNPDLO14979 420 aaKnown RBP26.52■■□□□ 1.84
SSBP4-201ENST00000270061 KIAA0391O15091 583 aaKnown RBP26.52■■□□□ 1.84
SSBP4-201ENST00000270061 NPTXRO95502 500 aa26.52■■□□□ 1.84
SSBP4-201ENST00000270061 VAMP7P51809 220 aa26.52■■□□□ 1.84
SSBP4-201ENST00000270061 AFF1P51825 1210 aaKnown RBP26.52■■□□□ 1.84
SSBP4-201ENST00000270061 ADGRD2Q7Z7M1 963 aa26.52■■□□□ 1.84
SSBP4-201ENST00000270061 CCDC170Q8IYT3 715 aa26.52■■□□□ 1.84
SSBP4-201ENST00000270061 RDH13Q8NBN7 331 aa26.52■■□□□ 1.84
SSBP4-201ENST00000270061 TMEM169Q96HH4 297 aa26.52■■□□□ 1.84
SSBP4-201ENST00000270061 APOL6Q9BWW8 343 aa26.52■■□□□ 1.84
SSBP4-201ENST00000270061 RNF39Q9H2S5 420 aa26.52■■□□□ 1.84
SSBP4-201ENST00000270061 NXF3Q9H4D5 531 aaKnown RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms