RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 KLHL29Q96CT2 875 aa23.54■■□□□ 1.36
CDR2-201ENST00000268383 NEU2Q9Y3R4 380 aa23.54■■□□□ 1.36
CDR2-201ENST00000268383 SPDYE2Q495Y8 402 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 GALNTL6Q49A17 601 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 ZBTB41Q5SVQ8 909 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 ZBTB45Q96K62 511 aaPredicted RBP23.53■■□□□ 1.36
CDR2-201ENST00000268383 FBXL18Q96ME1 805 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 OSBPL8Q9BZF1 889 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 RIPK3Q9Y572 518 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 PLA2G6O60733 806 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 NLRP11P59045 1033 aaKnown RBP23.53■■□□□ 1.36
CDR2-201ENST00000268383 TMEM270Q6UE05 265 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 OGFOD1Q8N543 542 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 PDCD2LQ9BRP1 358 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 ZNF277Q9NRM2 450 aaPredicted RBP23.53■■□□□ 1.36
CDR2-201ENST00000268383 RASA4BC9J798 803 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 RASA4O43374 803 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 APBA3O96018 575 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 HLA-DRAP01903 254 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 MTM1Q13496 603 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 TDRD10Q5VZ19 366 aaKnown RBP23.53■■□□□ 1.36
CDR2-201ENST00000268383 STYK1Q6J9G0 422 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 TMC2Q8TDI7 906 aa23.53■■□□□ 1.36
CDR2-201ENST00000268383 RBM15Q96T37 977 aaKnown RBP eCLIP23.53■■□□□ 1.362e-6■■■□□ 18.7
CDR2-201ENST00000268383 POC1B-GALNT4F8VUJ3 575 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 PROSCO94903 275 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 SLC8A1P32418 973 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 WDR4P57081 412 aaKnown RBP23.52■■□□□ 1.36
CDR2-201ENST00000268383 COPS2P61201 443 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 RPL7AP62424 266 aaKnown RBP23.52■■□□□ 1.36
CDR2-201ENST00000268383 FAM182AQ5T1J6 154 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 ARHGEF16Q5VV41 709 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 SWSAP1Q6NVH7 229 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 MIS18BP1Q6P0N0 1132 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 MON1BQ7L1V2 547 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 DEFB129Q9H1M3 183 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 BANF1O75531 89 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 BNIP1Q12981 228 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 NIPA1Q7RTP0 329 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 GRK7Q8WTQ7 553 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 APOBEC3GQ9HC16 384 aaKnown RBP23.52■■□□□ 1.36
CDR2-201ENST00000268383 XPNPEP1Q9NQW7 623 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 ADAM22Q9P0K1 906 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 ARL2BPQ9Y2Y0 163 aa23.52■■□□□ 1.36
CDR2-201ENST00000268383 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.52■■□□□ 1.36
CDR2-201ENST00000268383 ATF7P17544 494 aaPredicted RBP23.51■■□□□ 1.35
CDR2-201ENST00000268383 GCNT1Q02742 428 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 MAMLD1Q13495 774 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 MCF2L2Q86YR7 1114 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 SAYSD1Q9NPB0 183 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 PXMP2Q9NR77 195 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 DNPEPQ9ULA0 475 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 PCDHB2Q9Y5E7 798 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 BRWD3Q6RI45 1802 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 TAC1P20366 129 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 CDC25CP30307 473 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 PIK3CAP42336 1068 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 ECHDC2Q86YB7 292 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 TAB3Q8N5C8 712 aaPredicted RBP23.51■■□□□ 1.35
CDR2-201ENST00000268383 MAGEC3Q8TD91 643 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 SLCO1B3Q9NPD5 702 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 SEPT9Q9UHD8 586 aaPredicted RBP23.51■■□□□ 1.35
CDR2-201ENST00000268383 PCDHB4Q9Y5E5 795 aa23.51■■□□□ 1.35
CDR2-201ENST00000268383 ASNSP08243 561 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 MAGEA4P43358 317 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 DNAJC3Q13217 504 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 HAPLN2Q9GZV7 340 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 C10orf88Q9H8K7 445 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 PRKAG3Q9UGI9 489 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 WDR81Q562E7 1941 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 COL2A1P02458 1487 aaPredicted RBP23.5■■□□□ 1.35
CDR2-201ENST00000268383 TLR3O15455 904 aaKnown RBP23.5■■□□□ 1.35
CDR2-201ENST00000268383 VNN1O95497 513 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 ATP5DP30049 168 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 SNRPFP62306 86 aaKnown RBP23.5■■□□□ 1.35
CDR2-201ENST00000268383 BAATQ14032 418 aaPredicted RBP23.5■■□□□ 1.35
CDR2-201ENST00000268383 C4orf33Q8N1A6 199 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 NSMCE1Q8WV22 266 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 FAM212AQ96EL1 285 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 MOV10L1Q9BXT6 1211 aaKnown RBP23.5■■□□□ 1.35
CDR2-201ENST00000268383 SLC38A10Q9HBR0 1119 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 AVENQ9NQS1 362 aaPredicted RBP23.5■■□□□ 1.35
CDR2-201ENST00000268383 ANKEF1Q9NU02 776 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 NKIRAS1Q9NYS0 192 aa23.5■■□□□ 1.35
CDR2-201ENST00000268383 ZNF541Q9H0D2 1346 aa23.49■■□□□ 1.35
CDR2-201ENST00000268383 CDH16O75309 829 aa23.49■■□□□ 1.35
CDR2-201ENST00000268383 ANP32DO95626 131 aa23.49■■□□□ 1.35
CDR2-201ENST00000268383 CYP1A1P04798 512 aaPredicted RBP23.49■■□□□ 1.35
CDR2-201ENST00000268383 GCAP28676 217 aa23.49■■□□□ 1.35
CDR2-201ENST00000268383 CENPCQ03188 943 aa23.49■■□□□ 1.35
CDR2-201ENST00000268383 BRDTQ58F21 947 aaPredicted RBP23.49■■□□□ 1.35
CDR2-201ENST00000268383 TXNRD3NBQ6F5E7 133 aa23.49■■□□□ 1.35
CDR2-201ENST00000268383 FNBP1Q96RU3 617 aa23.49■■□□□ 1.35
CDR2-201ENST00000268383 CFAP73A6NFT4 308 aa23.49■■□□□ 1.35
CDR2-201ENST00000268383 HARSP12081 509 aaKnown RBP23.49■■□□□ 1.35
CDR2-201ENST00000268383 JAK3P52333 1124 aa23.49■■□□□ 1.35
CDR2-201ENST00000268383 ZNF268Q14587 947 aaPredicted RBP23.49■■□□□ 1.35
CDR2-201ENST00000268383 RHOT1Q8IXI2 618 aa23.49■■□□□ 1.35
CDR2-201ENST00000268383 TACO1Q9BSH4 297 aaKnown RBP23.49■■□□□ 1.35
CDR2-201ENST00000268383 PCDHA10Q9Y5I2 948 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms