RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 ISCUQ9H1K1 167 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 PUF60Q9UHX1 559 aaKnown RBP22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 SNX12Q9UMY4 172 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 NCANO14594 1321 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 SCN10AQ9Y5Y9 1956 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 GRID2IPA4D2P6 1211 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 RTN2O75298 545 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 TFRCP02786 760 aaKnown RBP22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 GZMAP12544 262 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 PRKAR2AP13861 404 aaKnown RBP22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 ABCB4P21439 1286 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 OAS2P29728 719 aaKnown RBP22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 GRM5P41594 1212 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 BPIFB4P59827 614 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 ANKZF1Q9H8Y5 726 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 XPNPEP3Q9NQH7 507 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 SRRDQ9UH36 339 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 PCDHB4Q9Y5E5 795 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 MROH7Q68CQ1 1323 aa22.04■■□□□ 1.12
LYSMD2-201ENST00000267838 SRGAP2O75044 1071 aa22.03■■□□□ 1.12
LYSMD2-201ENST00000267838 ADAMTS4O75173 837 aa22.03■■□□□ 1.12
LYSMD2-201ENST00000267838 NPTXRO95502 500 aa22.03■■□□□ 1.12
LYSMD2-201ENST00000267838 HOXD10P28358 340 aa22.03■■□□□ 1.12
LYSMD2-201ENST00000267838 SNX17Q15036 470 aa22.03■■□□□ 1.12
LYSMD2-201ENST00000267838 NBPF20Q3BBV1 942 aa22.03■■□□□ 1.12
LYSMD2-201ENST00000267838 NOTUMQ6P988 496 aa22.03■■□□□ 1.12
LYSMD2-201ENST00000267838 SLC27A1Q6PCB7 646 aa22.03■■□□□ 1.12
LYSMD2-201ENST00000267838 CD99L2Q8TCZ2 262 aa22.03■■□□□ 1.12
LYSMD2-201ENST00000267838 CALCOCO1Q9P1Z2 691 aa22.03■■□□□ 1.12
LYSMD2-201ENST00000267838 CNTN6Q9UQ52 1028 aa22.03■■□□□ 1.12
LYSMD2-201ENST00000267838 PCDHB2Q9Y5E7 798 aa22.03■■□□□ 1.12
LYSMD2-201ENST00000267838 MAP2K7O14733 419 aa22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 FTLP02792 175 aaPredicted RBP22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 PRLRP16471 622 aa22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 ZNF699Q32M78 642 aa22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 TAF2Q6P1X5 1199 aa22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 HDXQ7Z353 690 aa22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 ZNF677Q86XU0 584 aa22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 TMEM40Q8WWA1 233 aa22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 RFFLQ8WZ73 363 aa22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 NIF3L1Q9GZT8 377 aa22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 THAP2Q9H0W7 228 aa22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 XYLT2Q9H1B5 865 aa22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 GTF2IRD1Q9UHL9 959 aa22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 TSKSQ9UJT2 592 aa22.02■■□□□ 1.12
LYSMD2-201ENST00000267838 NCK2O43639 380 aa22.02■■□□□ 1.11
LYSMD2-201ENST00000267838 AXLP30530 894 aa22.02■■□□□ 1.11
LYSMD2-201ENST00000267838 CRYBB1P53674 252 aaPredicted RBP22.02■■□□□ 1.11
LYSMD2-201ENST00000267838 TMEM270Q6UE05 265 aa22.02■■□□□ 1.11
LYSMD2-201ENST00000267838 UBR7Q8N806 425 aa22.02■■□□□ 1.11
LYSMD2-201ENST00000267838 C1orf127Q8N9H9 656 aa22.02■■□□□ 1.11
LYSMD2-201ENST00000267838 TPCN2Q8NHX9 752 aa22.02■■□□□ 1.11
LYSMD2-201ENST00000267838 TLR10Q9BXR5 811 aa22.02■■□□□ 1.11
LYSMD2-201ENST00000267838 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.02■■□□□ 1.11
LYSMD2-201ENST00000267838 HYOU1Q9Y4L1 999 aa22.02■■□□□ 1.11
LYSMD2-201ENST00000267838 FAM170AA1A519 330 aa22.01■■□□□ 1.11
LYSMD2-201ENST00000267838 FTCDO95954 541 aa22.01■■□□□ 1.11
LYSMD2-201ENST00000267838 CALCAP01258 141 aa22.01■■□□□ 1.11
LYSMD2-201ENST00000267838 KRT19P08727 400 aa22.01■■□□□ 1.11
LYSMD2-201ENST00000267838 MAP2K2P36507 400 aa22.01■■□□□ 1.11
LYSMD2-201ENST00000267838 TMEM132DQ14C87 1099 aa22.01■■□□□ 1.11
LYSMD2-201ENST00000267838 RBBP8NLQ8NC74 664 aaPredicted RBP22.01■■□□□ 1.11
LYSMD2-201ENST00000267838 SLC35G2Q8TBE7 412 aa22.01■■□□□ 1.11
LYSMD2-201ENST00000267838 TAF4BQ92750 862 aa22.01■■□□□ 1.11
LYSMD2-201ENST00000267838 ARHGEF26Q96DR7 871 aa22.01■■□□□ 1.11
LYSMD2-201ENST00000267838 SIX4Q9UIU6 781 aa22.01■■□□□ 1.11
LYSMD2-201ENST00000267838 CITO14578 2027 aa22.01■■□□□ 1.11
LYSMD2-201ENST00000267838 HMGCRP04035 888 aa22■■□□□ 1.11
LYSMD2-201ENST00000267838 TCP1P17987 556 aaKnown RBP22■■□□□ 1.11
LYSMD2-201ENST00000267838 MEI1Q5TIA1 1274 aa22■■□□□ 1.11
LYSMD2-201ENST00000267838 CD302Q8IX05 232 aa22■■□□□ 1.11
LYSMD2-201ENST00000267838 LRRC57Q8N9N7 239 aa22■■□□□ 1.11
LYSMD2-201ENST00000267838 OSBPL9Q96SU4 736 aa22■■□□□ 1.11
LYSMD2-201ENST00000267838 EIF2AQ9BY44 585 aaKnown RBP22■■□□□ 1.11
LYSMD2-201ENST00000267838 C2CD2Q9Y426 696 aa22■■□□□ 1.11
LYSMD2-201ENST00000267838 RALGAPA2Q2PPJ7 1873 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 POLR3GO15318 223 aaPredicted RBP21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 GDF6Q6KF10 455 aaPredicted RBP21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 NT5DC4Q86YG4 428 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 KLHDC9Q8NEP7 349 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 CAPZA3Q96KX2 299 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 OSGEPQ9NPF4 335 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 ZNF185O15231 689 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 ITGB3P05106 788 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 ASGR1P07306 291 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 MCM3P25205 808 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 GPC5P78333 572 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 CKAP4Q07065 602 aaKnown RBP21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 KCNA10Q16322 511 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 CLEC16AQ2KHT3 1053 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 BEND6Q5SZJ8 279 aaPredicted RBP21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 RHOT2Q8IXI1 618 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 CXorf38Q8TB03 319 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 RPGRIP1Q96KN7 1286 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 CELF4Q9BZC1 486 aaKnown RBP21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 PLEKHA5Q9HAU0 1116 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 SNTG2Q9NY99 539 aa21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 PIN4Q9Y237 131 aaKnown RBP21.99■■□□□ 1.11
LYSMD2-201ENST00000267838 CST5P28325 142 aaPredicted RBP21.98■■□□□ 1.11
LYSMD2-201ENST00000267838 GNA15P30679 374 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms