RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 ZNF786Q8N393 782 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 SCAIQ8N9R8 606 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 GDPD5Q8WTR4 605 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 NUP85Q9BW27 656 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 WDR64B1ANS9 1081 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 IFRD2Q12894 506 aaPredicted RBP11.23□□□□□ -0.61
CPT1A-201ENST00000265641 TTC39BQ5VTQ0 682 aaPredicted RBP11.23□□□□□ -0.61
CPT1A-201ENST00000265641 C4orf22Q6V702 233 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 PPM1NQ8N819 430 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 ZBTB8BQ8NAP8 495 aaPredicted RBP11.23□□□□□ -0.61
CPT1A-201ENST00000265641 CYGBQ8WWM9 190 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 RAD54LQ92698 747 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 VPS39Q96JC1 886 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 LRMDAQ9H2I8 198 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 HPSEQ9Y251 543 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 PCDHB4Q9Y5E5 795 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 CPDO75976 1380 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 CCDC78A2IDD5 438 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 DNALI1O14645 258 aaPredicted RBP11.23□□□□□ -0.61
CPT1A-201ENST00000265641 PIK3CAP42336 1068 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 SNX17Q15036 470 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 CDKAL1Q5VV42 579 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 DGKHQ86XP1 1220 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 ZFYVE19Q96K21 471 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 COX4I2Q96KJ9 171 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 QKIQ96PU8 341 aaKnown RBP eCLIP11.23□□□□□ -0.61
CPT1A-201ENST00000265641 C7orf25Q9BPX7 421 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 ASPSCR1Q9BZE9 553 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 FANCEQ9HB96 536 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 DDX18Q9NVP1 670 aaKnown RBP11.23□□□□□ -0.61
CPT1A-201ENST00000265641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.613e-6■□□□□ 8.6
CPT1A-201ENST00000265641 PCDHA1Q9Y5I3 950 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 USP1O94782 785 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 SNRPAP09012 282 aaKnown RBP11.23□□□□□ -0.61
CPT1A-201ENST00000265641 SRGAP2CP0DJJ0 459 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 COILP38432 576 aaPredicted RBP11.23□□□□□ -0.61
CPT1A-201ENST00000265641 STX5Q13190 355 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 DGUOKQ16854 277 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 SGSM1Q2NKQ1 1148 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 GPATCH4Q5T3I0 446 aaKnown RBP11.23□□□□□ -0.61
CPT1A-201ENST00000265641 MCRS1Q96EZ8 462 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 OTUD5Q96G74 571 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 CDC42BPGQ6DT37 1551 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 SPATA31D1Q6ZQQ2 1576 aa11.23□□□□□ -0.61
CPT1A-201ENST00000265641 SP100P23497 879 aaPredicted RBP11.22□□□□□ -0.61
CPT1A-201ENST00000265641 CASP2P42575 452 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 HSPA2P54652 639 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 HERVK_113P62684 666 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 CEP78Q5JTW2 689 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 SCYL2Q6P3W7 929 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 TMC3Q7Z5M5 1100 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 DNAAF2Q9NVR5 837 aaKnown RBP11.22□□□□□ -0.61
CPT1A-201ENST00000265641 TBCCD1Q9NVR7 557 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 FAM8A1Q9UBU6 413 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 TAF4O00268 1085 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 SEC24DO94855 1032 aaPredicted RBP11.22□□□□□ -0.61
CPT1A-201ENST00000265641 CCDC130P13994 396 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 MCAMP43121 646 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 MEI1Q5TIA1 1274 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 RCOR2Q8IZ40 523 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 RASSF5Q8WWW0 418 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 TUBGCP5Q96RT8 1024 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 ZNF219Q9P2Y4 722 aaPredicted RBP11.22□□□□□ -0.61
CPT1A-201ENST00000265641 MBD2Q9UBB5 411 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 GRID1Q9ULK0 1009 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 GTPBP10A4D1E9 387 aaKnown RBP11.22□□□□□ -0.61
CPT1A-201ENST00000265641 VWA5AO00534 786 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 ZNF200P98182 395 aaPredicted RBP11.22□□□□□ -0.61
CPT1A-201ENST00000265641 GRM1Q13255 1194 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 KIF22Q14807 665 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 TXNRD1Q16881 649 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 TMC4Q7Z404 712 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 NEU2Q9Y3R4 380 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 ZNF609O15014 1411 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 PPP1R3GB7ZBB8 358 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 UFL1O94874 794 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 PAMP19021 973 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 LIG4P49917 911 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 CHRNDQ07001 517 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 MYBPC2Q14324 1141 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 FAM102BQ5T8I3 360 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 BNC2Q6ZN30 1099 aaPredicted RBP11.22□□□□□ -0.61
CPT1A-201ENST00000265641 LRRC47Q8N1G4 583 aaKnown RBP11.22□□□□□ -0.61
CPT1A-201ENST00000265641 GIMAP8Q8ND71 665 aaPredicted RBP11.22□□□□□ -0.61
CPT1A-201ENST00000265641 SUN5Q8TC36 379 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 TEKT3Q9BXF9 490 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 SEL1LQ9UBV2 794 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 RPS8P62241 208 aaKnown RBP11.22□□□□□ -0.61
CPT1A-201ENST00000265641 SPIDRQ14159 915 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 TUBA3EQ6PEY2 450 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 USP49Q70CQ1 688 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 MINDY2Q8NBR6 621 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 C19orf60Q96EN9 201 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 DEPDC7Q96QD5 511 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 NACC1Q96RE7 527 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 STK33Q9BYT3 514 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 TRIM9Q9C026 710 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 SMYD2Q9NRG4 433 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 KIF17Q9P2E2 1029 aa11.22□□□□□ -0.61
CPT1A-201ENST00000265641 SOX13Q9UN79 622 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms