RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.19■□□□□ 0.34
GPC1-201ENST00000264039 TRIM56Q9BRZ2 755 aaKnown RBP17.19■□□□□ 0.34
GPC1-201ENST00000264039 OSBPL8Q9BZF1 889 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 RANBP17Q9H2T7 1088 aaKnown RBP17.19■□□□□ 0.34
GPC1-201ENST00000264039 FAM237BA0A1B0GVD1 139 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 TMCC1O94876 653 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 Q4G0T1 1027 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 TBC1D9BQ66K14 1250 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 LMBRD2Q68DH5 695 aaPredicted RBP17.19■□□□□ 0.34
GPC1-201ENST00000264039 TRIM67Q6ZTA4 783 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 SLC47A2Q86VL8 602 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 ART4Q93070 314 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 APOL6Q9BWW8 343 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 EPB41L4BQ9H329 900 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.19■□□□□ 0.34
GPC1-201ENST00000264039 E2F8A0AVK6 867 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 PALM3A6NDB9 673 aaPredicted RBP17.18■□□□□ 0.34
GPC1-201ENST00000264039 GAS7O60861 476 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 MX2P20592 715 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 MAN1A1P33908 653 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 CNGA3Q16281 694 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 TMEM132AQ24JP5 1023 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 MAP7D1Q3KQU3 841 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 ADGRF4Q8IZF3 695 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 CETPP11597 493 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 TNNI1P19237 187 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 RASA1P20936 1047 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 ADARP55265 1226 aaKnown RBP17.18■□□□□ 0.34
GPC1-201ENST00000264039 CYLC2Q14093 348 aaPredicted RBP17.18■□□□□ 0.34
GPC1-201ENST00000264039 SLFN12Q8IYM2 578 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 PHACTR1Q9C0D0 580 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 OCEL1Q9H607 264 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 KIAA1586Q9HCI6 787 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 ARHGAP23Q9P227 1491 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 MEGF6O75095 1541 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 OR6B1O95007 311 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 NPEPPSP55786 919 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 PPP2R5DQ14738 602 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 MARK2Q7KZI7 788 aaKnown RBP17.18■□□□□ 0.34
GPC1-201ENST00000264039 SATL1Q86VE3 508 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 STARD13Q9Y3M8 1113 aa17.18■□□□□ 0.34
GPC1-201ENST00000264039 TISP43B9A030 160 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 EDF1O60869 148 aaKnown RBP17.17■□□□□ 0.34
GPC1-201ENST00000264039 ALADP13716 330 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 VAV1P15498 845 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 PTGIRP43119 386 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 SH3BGRP55822 239 aaPredicted RBP17.17■□□□□ 0.34
GPC1-201ENST00000264039 GIT2Q14161 759 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 ZNF394Q53GI3 561 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 TCHHL1Q5QJ38 904 aaPredicted RBP17.17■□□□□ 0.34
GPC1-201ENST00000264039 CLEC4GQ6UXB4 293 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 RSPH3Q86UC2 560 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 ALYREFQ86V81 257 aaKnown RBP17.17■□□□□ 0.34
GPC1-201ENST00000264039 DHX38Q92620 1227 aaKnown RBP17.17■□□□□ 0.34
GPC1-201ENST00000264039 CCDC97Q96F63 343 aaPredicted RBP17.17■□□□□ 0.34
GPC1-201ENST00000264039 FAM84AQ96KN4 292 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 F5H423 210 aaPredicted RBP17.17■□□□□ 0.34
GPC1-201ENST00000264039 CLPTM1O96005 669 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 SKIV2L2P42285 1042 aaKnown RBP17.17■□□□□ 0.34
GPC1-201ENST00000264039 YARSP54577 528 aaKnown RBP17.17■□□□□ 0.34
GPC1-201ENST00000264039 NR1H3Q13133 447 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 FASTKD3Q14CZ7 662 aaKnown RBP17.17■□□□□ 0.34
GPC1-201ENST00000264039 ZC3H12AQ5D1E8 599 aaKnown RBP17.17■□□□□ 0.34
GPC1-201ENST00000264039 RINT1Q6NUQ1 792 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 FAM81BQ96LP2 452 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 PI4K2AQ9BTU6 479 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 MFAP3P55082 362 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 PARP10Q53GL7 1025 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 RIPOR1Q6ZS17 1223 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 CADPS2Q86UW7 1296 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 LRGUKQ96M69 825 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 NT5C1BQ96P26 610 aa17.17■□□□□ 0.34
GPC1-201ENST00000264039 KIF13AQ9H1H9 1805 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 MON2Q7Z3U7 1717 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 PEX1O43933 1283 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 GGPS1O95749 300 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 DRG2P55039 364 aaKnown RBP17.16■□□□□ 0.34
GPC1-201ENST00000264039 WHRNQ9P202 907 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 PSMC3IPQ9P2W1 217 aaPredicted RBP17.16■□□□□ 0.34
GPC1-201ENST00000264039 PCYOX1Q9UHG3 505 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 R3HDM2Q9Y2K5 976 aaKnown RBP17.16■□□□□ 0.34
GPC1-201ENST00000264039 ZNF804BA4D1E1 1349 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 WFS1O76024 890 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 TCN1P20061 433 aaPredicted RBP17.16■□□□□ 0.34
GPC1-201ENST00000264039 PRKCIP41743 596 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 ARHGAP4P98171 946 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 PPATQ06203 517 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 HIF1AQ16665 826 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 MFSD14BQ5SR56 506 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 MFSD4BQ5TF39 518 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 CRLF3Q8IUI8 442 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 SETDB2Q96T68 719 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 ZWILCHQ9H900 591 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 DOLKQ9UPQ8 538 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 PNMA6FA0A0J9YX94 578 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 ZNF200P98182 395 aaPredicted RBP17.16■□□□□ 0.34
GPC1-201ENST00000264039 TFDP1Q14186 410 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 SLC5A9Q2M3M2 681 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 NXNQ6DKJ4 435 aa17.16■□□□□ 0.34
GPC1-201ENST00000264039 RINLQ6ZS11 566 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms