RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 NBNO60934 754 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 MYL2P10916 166 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 CHN1P15882 459 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 CCND1P24385 295 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 ACCSLQ4AC99 568 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 TTC39BQ5VTQ0 682 aaPredicted RBP18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 RFX8Q6ZV50 586 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 CLEC4FQ8N1N0 589 aa18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 RBM15Q96T37 977 aaKnown RBP eCLIP18.34■□□□□ 0.53
NOTCH3-201ENST00000263388 ROBO2Q9HCK4 1378 aa18.33■□□□□ 0.53
NOTCH3-201ENST00000263388 THEMIS2Q5TEJ8 643 aa18.33■□□□□ 0.53
NOTCH3-201ENST00000263388 WASHC5Q12768 1159 aa18.33■□□□□ 0.53
NOTCH3-201ENST00000263388 ANKRD40Q6AI12 368 aa18.33■□□□□ 0.53
NOTCH3-201ENST00000263388 TRAPPC11Q7Z392 1133 aa18.33■□□□□ 0.53
NOTCH3-201ENST00000263388 CYGBQ8WWM9 190 aa18.33■□□□□ 0.53
NOTCH3-201ENST00000263388 PPP1R36Q96LQ0 422 aa18.33■□□□□ 0.53
NOTCH3-201ENST00000263388 ZBED2Q9BTP6 218 aa18.33■□□□□ 0.53
NOTCH3-201ENST00000263388 PCDHA10Q9Y5I2 948 aa18.33■□□□□ 0.53
NOTCH3-201ENST00000263388 NUDT18Q6ZVK8 323 aa18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 LRRC1Q9BTT6 524 aa18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 ZC3H7BQ9UGR2 993 aaKnown RBP18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 CHD4Q14839 1912 aa18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 C7orf25Q9BPX7 421 aa18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 ABT1Q9ULW3 272 aaKnown RBP18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 CAB39Q9Y376 341 aaPredicted RBP18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 CYFIP1Q7L576 1253 aa18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 LUZP2Q86TE4 346 aa18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 ZNF473Q8WTR7 871 aaKnown RBP18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 TMA16Q96EY4 203 aaKnown RBP18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 ASCC2Q9H1I8 757 aaPredicted RBP18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 MBD5Q9P267 1494 aa18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 A8MXQ7 604 aa18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 SMAPO00193 183 aa18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 LCP1P13796 627 aa18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 BTBD8Q5XKL5 378 aa18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 WRNIP1Q96S55 665 aa18.33■□□□□ 0.52
NOTCH3-201ENST00000263388 USP27XA6NNY8 438 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 CYP2D6P10635 497 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 VEPH1Q14D04 833 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 STILQ15468 1287 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 SETD3Q86TU7 594 aaPredicted RBP18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 SIK2Q9H0K1 926 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 NEU2Q9Y3R4 380 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 KRR1Q13601 381 aaKnown RBP18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 CYTH1Q15438 398 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 HORMAD1Q86X24 394 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 TRIM9Q9C026 710 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 RAVER2Q9HCJ3 691 aaKnown RBP18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 KDM6AO15550 1401 aaPredicted RBP18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 C5orf58C9J3I9 102 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 IMPDH2P12268 514 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 SRLQ86TD4 932 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 PTPRN2Q92932 1015 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 UNC45AQ9H3U1 944 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 PRDX5P30044 214 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 PID1Q7Z2X4 250 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 PDE4DIPQ5VU43 2346 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 AKAP10O43572 662 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 SERPINB1P30740 379 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 FMO5P49326 533 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 HLFQ16534 295 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 CENPPQ6IPU0 288 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 ZNF185O15231 689 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 ADORA2BP29275 332 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 RUNX1T1Q06455 604 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 HAUS6Q7Z4H7 955 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 ACAD9Q9H845 621 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 RNF146Q9NTX7 359 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 TMEM161AQ9NX61 479 aa18.32■□□□□ 0.52
NOTCH3-201ENST00000263388 ATPAF2Q8N5M1 289 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 CCDC134Q9H6E4 229 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 ZCCHC17Q9NP64 241 aaKnown RBP18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 RAB6BQ9NRW1 208 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 LIMA1Q9UHB6 759 aaKnown RBP18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 ABCA9Q8IUA7 1624 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 PSMA3P25788 255 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 STX3Q13277 289 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 NR1I3Q14994 352 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 TADA1Q96BN2 335 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 PNPLA7Q6ZV29 1317 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 SEC16BQ96JE7 1060 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 NFKBIL1Q9UBC1 381 aaPredicted RBP18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 AFF4Q9UHB7 1163 aaKnown RBP18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 ECE2O60344 883 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 VSNL1P62760 191 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 ROPN1BQ9BZX4 212 aaPredicted RBP18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 ROPN1Q9HAT0 212 aaPredicted RBP18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 GID8Q9NWU2 228 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 F5H6K3 240 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 SRGNP10124 158 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 KLRC3Q07444 240 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 C4orf22Q6V702 233 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 HDDC2Q7Z4H3 204 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 ANKMY2Q8IV38 441 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 IL17RAQ96F46 866 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 TRAPPC3O43617 180 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 SNRPFP62306 86 aaKnown RBP18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 SPATA18Q8TC71 538 aa18.31■□□□□ 0.52
NOTCH3-201ENST00000263388 TULP4Q9NRJ4 1543 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms