RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CCDC122Q5T0U0 273 aa24.57■■□□□ 1.52
SMARCB1-201ENST00000263121 C10orf76Q5T2E6 689 aa24.57■■□□□ 1.52
SMARCB1-201ENST00000263121 SMYD5Q6GMV2 418 aa24.57■■□□□ 1.52
SMARCB1-201ENST00000263121 AGPAT1Q99943 283 aa24.57■■□□□ 1.52
SMARCB1-201ENST00000263121 APOL6Q9BWW8 343 aa24.57■■□□□ 1.52
SMARCB1-201ENST00000263121 IRX2Q9BZI1 471 aaPredicted RBP24.57■■□□□ 1.52
SMARCB1-201ENST00000263121 TSGA10Q9BZW7 698 aa24.57■■□□□ 1.52
SMARCB1-201ENST00000263121 VRTNQ9H8Y1 702 aa24.57■■□□□ 1.52
SMARCB1-201ENST00000263121 LUC7LQ9NQ29 371 aaKnown RBP24.57■■□□□ 1.52
SMARCB1-201ENST00000263121 DPP3Q9NY33 737 aa24.57■■□□□ 1.52
SMARCB1-201ENST00000263121 TRIP11Q15643 1979 aa24.57■■□□□ 1.52
SMARCB1-201ENST00000263121 KRT86O43790 486 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 KRT19P08727 400 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 ATICP31939 592 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 KIF5AQ12840 1032 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 PAK2Q13177 524 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 NAB2Q15742 525 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 SYT10Q6XYQ8 523 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 NOP9Q86U38 636 aaKnown RBP24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 SLC47A2Q86VL8 602 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 GLYCTKQ8IVS8 523 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 TXLNBQ8N3L3 684 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 USP38Q8NB14 1042 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 SLC20A1Q8WUM9 679 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 FAXDC2Q96IV6 333 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 TSPAN18Q96SJ8 248 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 PCDHB2Q9Y5E7 798 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 ATP8B3O60423 1300 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 BRCA2P51587 3418 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 KIF5CO60282 957 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 KRT5P13647 590 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 KCNE1P15382 129 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 CYP11B1P15538 503 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 GUCY2FP51841 1108 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 GNG11P61952 73 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 ALKBH5Q6P6C2 394 aaKnown RBP24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 CTU1Q7Z7A3 348 aaKnown RBP24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 FAM105AQ9NUU6 356 aa24.56■■□□□ 1.52
SMARCB1-201ENST00000263121 CLSTN1O94985 981 aa24.55■■□□□ 1.52
SMARCB1-201ENST00000263121 STAU1O95793 577 aaKnown RBP24.55■■□□□ 1.52
SMARCB1-201ENST00000263121 TNFAIP3P21580 790 aa24.55■■□□□ 1.52
SMARCB1-201ENST00000263121 POLR2BP30876 1174 aaKnown RBP24.55■■□□□ 1.52
SMARCB1-201ENST00000263121 ASPAP45381 313 aa24.55■■□□□ 1.52
SMARCB1-201ENST00000263121 DSC3Q14574 896 aa24.55■■□□□ 1.52
SMARCB1-201ENST00000263121 TRAIPQ9BWF2 469 aa24.55■■□□□ 1.52
SMARCB1-201ENST00000263121 ACP6Q9NPH0 428 aa24.55■■□□□ 1.52
SMARCB1-201ENST00000263121 MYO1AQ9UBC5 1043 aa24.55■■□□□ 1.52
SMARCB1-201ENST00000263121 PARP2Q9UGN5 583 aa24.55■■□□□ 1.52
SMARCB1-201ENST00000263121 GUCA1BQ9UMX6 200 aa24.55■■□□□ 1.52
SMARCB1-201ENST00000263121 FANCGO15287 622 aa24.54■■□□□ 1.52
SMARCB1-201ENST00000263121 HSPA8P11142 646 aaKnown RBP24.54■■□□□ 1.52
SMARCB1-201ENST00000263121 CHRNB2P17787 502 aa24.54■■□□□ 1.52
SMARCB1-201ENST00000263121 RBP5P82980 135 aa24.54■■□□□ 1.52
SMARCB1-201ENST00000263121 FAM126BQ8IXS8 530 aa24.54■■□□□ 1.52
SMARCB1-201ENST00000263121 DDX1Q92499 740 aaKnown RBP24.54■■□□□ 1.52
SMARCB1-201ENST00000263121 WDR24Q96S15 920 aa24.54■■□□□ 1.52
SMARCB1-201ENST00000263121 CRISPLD2Q9H0B8 497 aa24.54■■□□□ 1.52
SMARCB1-201ENST00000263121 DNAI1Q9UI46 699 aa24.54■■□□□ 1.52
SMARCB1-201ENST00000263121 AGAP1Q9UPQ3 857 aa24.54■■□□□ 1.52
SMARCB1-201ENST00000263121 ZSCAN20P17040 1043 aaPredicted RBP24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 PDE6CP51160 858 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 ZNF667Q5HYK9 610 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 RPUSD2Q8IZ73 545 aaKnown RBP24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 BEST2Q8NFU1 509 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 KIF18AQ8NI77 898 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 CAGE1Q8TC20 777 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 U2AF1L4Q8WU68 220 aaKnown RBP24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 ZNF592Q92610 1267 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 BCO2Q9BYV7 579 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 KLK14Q9P0G3 267 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 TUBGCP4Q9UGJ1 667 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 UBQLN1Q9UMX0 589 aaKnown RBP24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 PCDHB4Q9Y5E5 795 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 DUSP10Q9Y6W6 482 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 SMIM28A0A1B0GU29 152 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 MGEA5O60502 916 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 CD4P01730 458 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 ZNF132P52740 706 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 BPIFB4P59827 614 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 CDR2Q01850 454 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 GLRA4Q5JXX5 417 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 FBXO46Q6PJ61 603 aaPredicted RBP24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 ZNF333Q96JL9 665 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 PACSIN1Q9BY11 444 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 POLIQ9UNA4 740 aa24.53■■□□□ 1.52
SMARCB1-201ENST00000263121 FMO1Q01740 532 aa24.52■■□□□ 1.52
SMARCB1-201ENST00000263121 MBTPS1Q14703 1052 aa24.52■■□□□ 1.52
SMARCB1-201ENST00000263121 TMEM270Q6UE05 265 aa24.52■■□□□ 1.52
SMARCB1-201ENST00000263121 MRPL10Q7Z7H8 261 aaKnown RBP24.52■■□□□ 1.52
SMARCB1-201ENST00000263121 PALB2Q86YC2 1186 aa24.52■■□□□ 1.52
SMARCB1-201ENST00000263121 HACE1Q8IYU2 909 aa24.52■■□□□ 1.52
SMARCB1-201ENST00000263121 RBBP8NLQ8NC74 664 aaPredicted RBP24.52■■□□□ 1.52
SMARCB1-201ENST00000263121 C18orf25Q96B23 403 aaPredicted RBP24.52■■□□□ 1.52
SMARCB1-201ENST00000263121 HPDLQ96IR7 371 aa24.52■■□□□ 1.52
SMARCB1-201ENST00000263121 MNX1P50219 401 aaPredicted RBP24.51■■□□□ 1.51
SMARCB1-201ENST00000263121 RAB27AP51159 221 aa24.51■■□□□ 1.51
SMARCB1-201ENST00000263121 WDR72Q3MJ13 1102 aa24.51■■□□□ 1.51
SMARCB1-201ENST00000263121 ZNF569Q5MCW4 686 aa24.51■■□□□ 1.51
SMARCB1-201ENST00000263121 CISHQ9NSE2 258 aa24.51■■□□□ 1.51
SMARCB1-201ENST00000263121 NXF1Q9UBU9 619 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms