RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 UBA3Q8TBC4 463 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 POLD3Q15054 466 aaPredicted RBP15.62■□□□□ 0.09
CCDC6-201ENST00000263102 PNMA5Q96PV4 448 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 ZFYVE1Q9HBF4 777 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 SYNGAP1Q96PV0 1343 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 LRRIQ3A6PVS8 624 aaPredicted RBP15.62■□□□□ 0.09
CCDC6-201ENST00000263102 FGFR1P11362 822 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 NCAM1P13591 858 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 KCNH2Q12809 1159 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 CAMK2GQ13555 558 aaPredicted RBP15.62■□□□□ 0.09
CCDC6-201ENST00000263102 KNOP1Q1ED39 458 aaKnown RBP15.62■□□□□ 0.09
CCDC6-201ENST00000263102 GOLGA7BQ2TAP0 167 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 CLEC4GQ6UXB4 293 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 KRT77Q7Z794 578 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 TMEM60Q9H2L4 133 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 STARD7Q9NQZ5 370 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 PCDHB12Q9Y5F1 795 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 H7C4K7 107 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 TCEA2Q15560 299 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 RIN3Q8TB24 985 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 RHOBTB1O94844 696 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 CD4P01730 458 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 PGK2P07205 417 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 AKR1B1P15121 316 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 GPC1P35052 558 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 CHI3L1P36222 383 aaPredicted RBP15.62■□□□□ 0.09
CCDC6-201ENST00000263102 RGS4P49798 205 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 ERFP50548 548 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 USP10Q14694 798 aaKnown RBP15.62■□□□□ 0.09
CCDC6-201ENST00000263102 CATSPERBQ9H7T0 1116 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 TMEM39AQ9NV64 488 aa15.62■□□□□ 0.09
CCDC6-201ENST00000263102 PSMD12O00232 456 aaPredicted RBP15.61■□□□□ 0.09
CCDC6-201ENST00000263102 SHROOM1Q2M3G4 852 aaPredicted RBP15.61■□□□□ 0.09
CCDC6-201ENST00000263102 SYTL1Q8IYJ3 562 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 ZNF555Q8NEP9 628 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 CPA5Q8WXQ8 436 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 FAM20AQ96MK3 541 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 RSPH9Q9H1X1 276 aaPredicted RBP15.61■□□□□ 0.09
CCDC6-201ENST00000263102 F8W810 466 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 STXBP3O00186 592 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 NDUFA10O95299 355 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 GTF2A2P52657 109 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 NCKAP1LP55160 1127 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 SP8Q8IXZ3 490 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 DDI1Q8WTU0 396 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 IL10P22301 178 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 ETF1P62495 437 aaKnown RBP15.61■□□□□ 0.09
CCDC6-201ENST00000263102 DCAF6Q58WW2 860 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 TMA16Q96EY4 203 aaKnown RBP15.61■□□□□ 0.09
CCDC6-201ENST00000263102 PODXLO00592 558 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 CYP26A1O43174 497 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 MYBL1P10243 752 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 MRPS15P82914 257 aaKnown RBP15.61■□□□□ 0.09
CCDC6-201ENST00000263102 C9orf131Q5VYM1 1079 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 BTNL9Q6UXG8 535 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 LUZP2Q86TE4 346 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 DDX42Q86XP3 938 aaKnown RBP eCLIP15.61■□□□□ 0.09
CCDC6-201ENST00000263102 MAP4K1Q92918 833 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 IL1RL2Q9HB29 575 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.61■□□□□ 0.091e-6■■■□□ 18.5
CCDC6-201ENST00000263102 CEP72Q9P209 647 aa15.61■□□□□ 0.09
CCDC6-201ENST00000263102 A0A087WUV0 522 aaPredicted RBP15.6■□□□□ 0.09
CCDC6-201ENST00000263102 GOLGA8RI6L899 631 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 MMEP08473 750 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 DPEP1P16444 411 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 AVPR1AP37288 418 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 ARSEP51690 589 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 HIRAP54198 1017 aaPredicted RBP15.6■□□□□ 0.09
CCDC6-201ENST00000263102 BRINP3Q76B58 766 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 TEX13BQ9BXU2 312 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 RPRD1BQ9NQG5 326 aaKnown RBP15.6■□□□□ 0.09
CCDC6-201ENST00000263102 WWOXQ9NZC7 414 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 MKL2Q9ULH7 1088 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 A0A1W2PQ27 194 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 A0A1W2PQ64 194 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 A0A1W2PQD8 194 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 PCNAP12004 261 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 RAG1P15918 1043 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 KLRC2P26717 231 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 AP3M2P53677 418 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 STARD3Q14849 445 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 GLRA4Q5JXX5 417 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 C20orf96Q9NUD7 363 aaPredicted RBP15.6■□□□□ 0.09
CCDC6-201ENST00000263102 NDE1Q9NXR1 346 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 TDP2O95551 362 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 MIER2Q8N344 545 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 ZNF70Q9UC06 446 aaPredicted RBP15.6■□□□□ 0.09
CCDC6-201ENST00000263102 NCF1BA6NI72 391 aaPredicted RBP15.6■□□□□ 0.09
CCDC6-201ENST00000263102 NCF1CA8MVU1 366 aaPredicted RBP15.6■□□□□ 0.09
CCDC6-201ENST00000263102 ODC1P11926 461 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 NCF1P14598 390 aaPredicted RBP15.6■□□□□ 0.09
CCDC6-201ENST00000263102 PDGFRAP16234 1089 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 YWHAQP27348 245 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 SERPINB4P48594 390 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 HDAC4P56524 1084 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 IFNEQ86WN2 208 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 TADA1Q96BN2 335 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 CPA4Q9UI42 421 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 NR1D1P20393 614 aa15.6■□□□□ 0.09
CCDC6-201ENST00000263102 SLC11A2P49281 568 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms