RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 PIGHQ14442 188 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-201ENST00000262539 SETDB1Q15047 1291 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 FYB2Q5VWT5 728 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 NOTUMQ6P988 496 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 ZNF572Q7Z3I7 529 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-201ENST00000262539 NLRP7Q8WX94 980 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 PARVAQ9NVD7 372 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 NRCAMQ92823 1304 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 PSTPIP1O43586 416 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 BNIP3LO60238 219 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 CUL2Q13617 745 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 ERICH1Q86X53 443 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 SCYL1Q96KG9 808 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 TINF2Q9BSI4 451 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 CCDC68Q9H2F9 335 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 NKIRAS1Q9NYS0 192 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 STAP1Q9ULZ2 295 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 UBR3Q6ZT12 1888 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 USP27XA6NNY8 438 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 H3BRB1 525 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 ZFXP17010 805 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-201ENST00000262539 CLCN6P51797 869 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 ASTE1Q2TB18 679 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-201ENST00000262539 IL31RAQ8NI17 732 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 SPATA17Q96L03 361 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 TTC25Q96NG3 672 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 PPP1R2P1Q96PQ5 205 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 LACRTQ9GZZ8 138 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 ISCUQ9H1K1 167 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 TUT1Q9H6E5 874 aaKnown RBP8.73□□□□□ -1.01
PTPN3-201ENST00000262539 PIDD1Q9HB75 910 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 XPNPEP1Q9NQW7 623 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 RPS6KA2Q15349 733 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 MAMDC4Q6UXC1 1216 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 GPIHBP1Q8IV16 184 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 CCDC60Q8IWA6 550 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-201ENST00000262539 ASNSD1Q9NWL6 643 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 SENP1Q9P0U3 644 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 HMGB1P1B2RPK0 211 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 VDRP11473 427 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 KLRC1P26715 233 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 MAPRE1Q15691 268 aaKnown RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 CEP85LQ5SZL2 805 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 USP38Q8NB14 1042 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 PPTC7Q8NI37 304 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 ZNF564Q8TBZ8 553 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 GNRH1P01148 92 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 RHOXF2BP0C7M4 288 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 TFAMQ00059 246 aaKnown RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 ACBD5Q5T8D3 534 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 MEI1Q5TIA1 1274 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 CCDC105Q8IYK2 499 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 STK32AQ8WU08 396 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 RSAD2Q8WXG1 361 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 ACAP3Q96P50 834 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 RHOXF2Q9BQY4 288 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 TARS2Q9BW92 718 aaKnown RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 PSD3Q9NYI0 1048 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 RBM47A0AV96 593 aaKnown RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 AP3B1O00203 1094 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 MAP2K5Q13163 448 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 HGSNATQ68CP4 663 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 SDCCAG8Q86SQ7 713 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 MREGQ8N565 214 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 RNF217Q8TC41 542 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 APBA2Q99767 749 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 CBWD1Q9BRT8 395 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 PCIF1Q9H4Z3 704 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 IPO11Q9UI26 975 aaKnown RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 CLGNO14967 610 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 SPAG6O75602 509 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 FTLP02792 175 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 SAT1P21673 171 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 ATP6V1E1P36543 226 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 FCGRTP55899 365 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 PTPN11Q06124 597 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 PRPSAP1Q14558 356 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 SPRYD7Q5W111 196 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 POLNQ7Z5Q5 900 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 RBBP8NLQ8NC74 664 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 NRXN2Q9P2S2 1712 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 MYH7P12883 1935 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 ASS1P00966 412 aaKnown RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 HMGCRP04035 888 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 PNMA6AP0CW24 399 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 RRP1BQ14684 758 aaKnown RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 ZC2HC1CQ53FD0 456 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 GKAP1Q5VSY0 366 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-201ENST00000262539 FBXO38Q6PIJ6 1188 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 ZSWIM1Q9BR11 485 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 SNX25Q9H3E2 840 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 FZD8Q9H461 694 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 EHD2Q9NZN4 543 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 PCDHAC2Q9Y5I4 1007 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 CASZ1Q86V15 1759 aa8.72□□□□□ -1.01
PTPN3-201ENST00000262539 IGKV6-21A0A0C4DH24 114 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 RSPH10B2B2RC85 870 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 PALMO75781 387 aa8.71□□□□□ -1.01
PTPN3-201ENST00000262539 RSPH10BP0C881 870 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms