RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 ZSCAN5DPP0CG00 497 aa15.69■□□□□ 0.1
KCTD3-201ENST00000259154 RARAP10276 462 aa15.69■□□□□ 0.1
KCTD3-201ENST00000259154 RARGP13631 454 aa15.69■□□□□ 0.1
KCTD3-201ENST00000259154 FNTAP49354 379 aa15.69■□□□□ 0.1
KCTD3-201ENST00000259154 CDK17Q00537 523 aa15.69■□□□□ 0.1
KCTD3-201ENST00000259154 ECM1Q16610 540 aa15.69■□□□□ 0.1
KCTD3-201ENST00000259154 TRMT10CQ7L0Y3 403 aaKnown RBP15.69■□□□□ 0.1
KCTD3-201ENST00000259154 NUDCD3Q8IVD9 361 aa15.69■□□□□ 0.1
KCTD3-201ENST00000259154 ALG3Q92685 438 aa15.69■□□□□ 0.1
KCTD3-201ENST00000259154 MTA3Q9BTC8 594 aa15.69■□□□□ 0.1
KCTD3-201ENST00000259154 TEKT3Q9BXF9 490 aa15.69■□□□□ 0.1
KCTD3-201ENST00000259154 TBC1D10AQ9BXI6 508 aa15.69■□□□□ 0.1
KCTD3-201ENST00000259154 CHST7Q9NS84 486 aa15.69■□□□□ 0.1
KCTD3-201ENST00000259154 C2orf71A6NGG8 1288 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 DNAJC8O75937 253 aaPredicted RBP15.68■□□□□ 0.1
KCTD3-201ENST00000259154 TFAMQ00059 246 aaKnown RBP15.68■□□□□ 0.1
KCTD3-201ENST00000259154 AUHQ13825 339 aaKnown RBP15.68■□□□□ 0.1
KCTD3-201ENST00000259154 XXYLT1Q8NBI6 393 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 KCTD6Q8NC69 237 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 ATL2Q8NHH9 583 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 NACC1Q96RE7 527 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 SBF2Q86WG5 1849 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 RNF8O76064 485 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 GH2P01242 217 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 TMEM253P0C7T8 217 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 EEF1B2P24534 225 aaKnown RBP15.68■□□□□ 0.1
KCTD3-201ENST00000259154 PTENP60484 403 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 FITM2Q8N6M3 262 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 ETAA1Q9NY74 926 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 LMNAP02545 664 aaKnown RBP15.68■□□□□ 0.1
KCTD3-201ENST00000259154 DMP1Q13316 513 aaPredicted RBP15.68■□□□□ 0.1
KCTD3-201ENST00000259154 PKN2Q16513 984 aaKnown RBP15.68■□□□□ 0.1
KCTD3-201ENST00000259154 PADI6Q6TGC4 694 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 RNF148Q8N7C7 305 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.68■□□□□ 0.17e-10■■■■■ 53
KCTD3-201ENST00000259154 FAF2Q96CS3 445 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 CEP170P1Q96L14 293 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 CCDC17Q96LX7 622 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 WNT8AQ9H1J5 351 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 VPS11Q9H270 941 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 NGRNQ9NPE2 291 aaKnown RBP15.68■□□□□ 0.1
KCTD3-201ENST00000259154 KMT5AQ9NQR1 393 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 PCDHGC5Q9Y5F6 944 aa15.68■□□□□ 0.1
KCTD3-201ENST00000259154 TCRBV7S2A1N4TA0A589 114 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 MEI4A8MW99 385 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 CRKP46108 304 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 KCTD21Q4G0X4 260 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 ZCWPW2Q504Y3 356 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 CHADLQ6NUI6 762 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 CYFIP1Q7L576 1253 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 ACCSQ96QU6 501 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 ZSWIM1Q9BR11 485 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 RTFDC1Q9BY42 306 aaPredicted RBP15.67■□□□□ 0.1
KCTD3-201ENST00000259154 GLT8D2Q9H1C3 349 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 BANF1O75531 89 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 GAP43P17677 238 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 GSCP56915 257 aaPredicted RBP15.67■□□□□ 0.1
KCTD3-201ENST00000259154 XRCC4Q13426 336 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 HIF1AQ16665 826 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 RAPH1Q70E73 1250 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 C3orf20Q8ND61 904 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 KCNQ5Q9NR82 932 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 LRRC4BQ9NT99 713 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.67■□□□□ 0.1
KCTD3-201ENST00000259154 DAGLAQ9Y4D2 1042 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 ASAP2O43150 1006 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 PGM3O95394 542 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 CHKAP35790 457 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 LLGL2Q6P1M3 1020 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 UTS2BQ765I0 119 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 NIM1KQ8IY84 436 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 PDZD8Q8NEN9 1154 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 NEDD1Q8NHV4 660 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 CNKSR1Q969H4 720 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 SENP7Q9BQF6 1050 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 OSBPL8Q9BZF1 889 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 MTFR1LQ9H019 292 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 LY75O60449 1722 aa15.67■□□□□ 0.1
KCTD3-201ENST00000259154 PALM3A6NDB9 673 aaPredicted RBP15.66■□□□□ 0.1
KCTD3-201ENST00000259154 SPDYE5A6NIY4 337 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 PDXKO00764 312 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 EDIL3O43854 480 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 ADCY3O60266 1144 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 MYL2P10916 166 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 NPR1P16066 1061 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 CALB2P22676 271 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 PHEXP78562 749 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 STAT4Q14765 748 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 CLIC5Q9NZA1 410 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 PI4KBQ9UBF8 816 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 POLLQ9UGP5 575 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 SCN7AQ01118 1682 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 TAF1LQ8IZX4 1826 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 GSTA1P08263 222 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 GHRP10912 638 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 CHRNA5P30532 468 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 GCLCP48506 637 aaPredicted RBP15.66■□□□□ 0.1
KCTD3-201ENST00000259154 ARL4CP56559 192 aa15.66■□□□□ 0.1
KCTD3-201ENST00000259154 DYNC1I2Q13409 638 aaKnown RBP15.66■□□□□ 0.1
KCTD3-201ENST00000259154 HADHQ16836 314 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms