RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 NCK2O43639 380 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 NOP2P46087 812 aaKnown RBP20.25■□□□□ 0.83
TRIM47-201ENST00000254816 NKX3-2P78367 333 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 WHAMMP3Q1A5X7 153 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 NOTUMQ6P988 496 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 TMEM270Q6UE05 265 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 C1orf127Q8N9H9 656 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 DDX1Q92499 740 aaKnown RBP20.25■□□□□ 0.83
TRIM47-201ENST00000254816 ARFGAP3Q9NP61 516 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 SIX4Q9UIU6 781 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 PIN4Q9Y237 131 aaKnown RBP20.25■□□□□ 0.83
TRIM47-201ENST00000254816 GRM5P41594 1212 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 SGSM1Q2NKQ1 1148 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 ZNF699Q32M78 642 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 DCAF4L1Q3SXM0 396 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 SCARA5Q6ZMJ2 495 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 THAP2Q9H0W7 228 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 RNF19AQ9NV58 838 aa20.25■□□□□ 0.83
TRIM47-201ENST00000254816 CTAGE15A4D2H0 777 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 ITGB3P05106 788 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 CTAGE8P0CG41 777 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 TBXAS1P24557 533 aaPredicted RBP20.24■□□□□ 0.83
TRIM47-201ENST00000254816 CRYBB1P53674 252 aaPredicted RBP20.24■□□□□ 0.83
TRIM47-201ENST00000254816 CDR2Q01850 454 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 GABPB1Q06547 395 aaPredicted RBP20.24■□□□□ 0.83
TRIM47-201ENST00000254816 MAP3K21Q5TCX8 1036 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 PAPD7Q5XG87 772 aaKnown RBP20.24■□□□□ 0.83
TRIM47-201ENST00000254816 CCSAPQ6IQ19 270 aaPredicted RBP20.24■□□□□ 0.83
TRIM47-201ENST00000254816 CTAGE6Q86UF2 777 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 CTAGE4Q8IX94 777 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 NME8Q8N427 588 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 NOA1Q8NC60 698 aaKnown RBP20.24■□□□□ 0.83
TRIM47-201ENST00000254816 ARHGEF26Q96DR7 871 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 XYLT2Q9H1B5 865 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 GOLPH3Q9H4A6 298 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 POLIQ9UNA4 740 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 JRKLQ9Y4A0 524 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 PDCD11Q14690 1871 aaKnown RBP20.24■□□□□ 0.83
TRIM47-201ENST00000254816 GRIN2DO15399 1336 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 BTNL10A8MVZ5 291 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 FTLP02792 175 aaPredicted RBP20.24■□□□□ 0.83
TRIM47-201ENST00000254816 CTSHP09668 335 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 CD58P19256 250 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 SSTR3P32745 418 aaPredicted RBP20.24■□□□□ 0.83
TRIM47-201ENST00000254816 TAF2Q6P1X5 1199 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 APOL6Q9BWW8 343 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 CELF4Q9BZC1 486 aaKnown RBP20.24■□□□□ 0.83
TRIM47-201ENST00000254816 NXF3Q9H4D5 531 aaKnown RBP20.24■□□□□ 0.83
TRIM47-201ENST00000254816 ASB7Q9H672 318 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 NXF1Q9UBU9 619 aaKnown RBP20.24■□□□□ 0.83
TRIM47-201ENST00000254816 DDX20Q9UHI6 824 aaKnown RBP20.24■□□□□ 0.83
TRIM47-201ENST00000254816 INTUQ9ULD6 942 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 SAR1BQ9Y6B6 198 aa20.24■□□□□ 0.83
TRIM47-201ENST00000254816 GRID2IPA4D2P6 1211 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 FTCDO95954 541 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 TMEM132DQ14C87 1099 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 KYAT1Q16773 422 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 ZNF296Q8WUU4 475 aaPredicted RBP20.23■□□□□ 0.83
TRIM47-201ENST00000254816 PSMB7Q99436 277 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 OSGEPQ9NPF4 335 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 CDY2AQ9Y6F7 541 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 CEP350Q5VT06 3117 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 ANO9A1A5B4 782 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 ZNF185O15231 689 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 WEE2P0C1S8 567 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 TMEM253P0C7T8 217 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 PTPROQ16827 1216 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 RBBP8NLQ8NC74 664 aaPredicted RBP20.23■□□□□ 0.83
TRIM47-201ENST00000254816 CTNNBL1Q8WYA6 563 aaPredicted RBP20.23■□□□□ 0.83
TRIM47-201ENST00000254816 CAPZA3Q96KX2 299 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 TRIM6Q9C030 488 aaPredicted RBP20.23■□□□□ 0.83
TRIM47-201ENST00000254816 NIF3L1Q9GZT8 377 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 ISCUQ9H1K1 167 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 TSKSQ9UJT2 592 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 PACSIN2Q9UNF0 486 aaPredicted RBP20.23■□□□□ 0.83
TRIM47-201ENST00000254816 NOC2LQ9Y3T9 749 aaKnown RBP20.23■□□□□ 0.83
TRIM47-201ENST00000254816 PCDHGC5Q9Y5F6 944 aa20.23■□□□□ 0.83
TRIM47-201ENST00000254816 ATP8B3O60423 1300 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 FRMPD3Q5JV73 1810 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 AKAP5P24588 427 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 MRPS6P82932 125 aaKnown RBP20.22■□□□□ 0.83
TRIM47-201ENST00000254816 FAM228AQ86W67 206 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 UBR7Q8N806 425 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 CXorf38Q8TB03 319 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 KIF12Q96FN5 646 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 CHORDC1Q9UHD1 332 aaPredicted RBP20.22■□□□□ 0.83
TRIM47-201ENST00000254816 SCN1AP35498 2009 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 CFHP08603 1231 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 RAP1GAPP47736 663 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 PCBP1Q15365 356 aaKnown RBP eCLIP20.22■□□□□ 0.83
TRIM47-201ENST00000254816 LONRF2Q1L5Z9 754 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 ZNF394Q53GI3 561 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 MSANTD4Q8NCY6 345 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 SLC35G2Q8TBE7 412 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 ZMAT2Q96NC0 199 aaKnown RBP20.22■□□□□ 0.83
TRIM47-201ENST00000254816 PRDM4Q9UKN5 801 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 PCDHB2Q9Y5E7 798 aa20.22■□□□□ 0.83
TRIM47-201ENST00000254816 CCDC151A5D8V7 595 aa20.21■□□□□ 0.83
TRIM47-201ENST00000254816 ANKRD62A6NC57 917 aa20.21■□□□□ 0.83
TRIM47-201ENST00000254816 FKTNO75072 461 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms