RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 VIPAS39Q9H9C1 493 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 ZNF197O14709 1029 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 DDX5P17844 614 aaKnown RBP19.95■□□□□ 0.78
PTPRE-201ENST00000254667 SREBF1P36956 1147 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 GRAMD1BQ3KR37 738 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 FASTKD1Q53R41 847 aaKnown RBP19.95■□□□□ 0.78
PTPRE-201ENST00000254667 ZC3H4Q9UPT8 1303 aaKnown RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 F5H423 210 aaPredicted RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 ATP9BO43861 1147 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 SPAG6O75602 509 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 STKLD1Q8NE28 680 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 ENGASEQ8NFI3 743 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 NDFIP2Q9NV92 336 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 SERPINB9P50453 376 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 ZNF484Q5JVG2 852 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 YAF2Q8IY57 180 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 RTFDC1Q9BY42 306 aaPredicted RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 SLC13A1Q9BZW2 595 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 TRIM45Q9H8W5 580 aaPredicted RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 AGPAT3Q9NRZ7 376 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 TPX2Q9ULW0 747 aaKnown RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 IQGAP1P46940 1657 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 EEF2KO00418 725 aaKnown RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 DIAPH2O60879 1101 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 PDE1CQ14123 709 aaPredicted RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 EFTUD2Q15029 972 aaKnown RBP eCLIP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 TRADDQ15628 312 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 NLRP14Q86W24 1093 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 LRRC71Q8N4P6 559 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 IL25Q9H293 177 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 PRDM5Q9NQX1 630 aaPredicted RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 CYP2C8P10632 490 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 HABP4Q5JVS0 413 aaKnown RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 THOC1Q96FV9 657 aaKnown RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 PRMT6Q96LA8 375 aaPredicted RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 MROH8Q9H579 483 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 NOP53Q9NZM5 478 aaKnown RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 PAK5Q9P286 719 aa19.94■□□□□ 0.78
PTPRE-201ENST00000254667 UBQLN1Q9UMX0 589 aaKnown RBP19.94■□□□□ 0.78
PTPRE-201ENST00000254667 TRPA1O75762 1119 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 EEF1B2P24534 225 aaKnown RBP19.93■□□□□ 0.78
PTPRE-201ENST00000254667 NPEPPSP55786 919 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 ERO1BQ86YB8 467 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 SALL1Q9NSC2 1324 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 PDGFRBP09619 1106 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 BACE1P56817 501 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 CENPCQ03188 943 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 PDK1Q15118 436 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 TSPAN17Q96FV3 270 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 KAZALD1Q96I82 304 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 MEGF6O75095 1541 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 MTSS1O43312 755 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 GPD1P21695 349 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 TARS2Q9BW92 718 aaKnown RBP19.93■□□□□ 0.78
PTPRE-201ENST00000254667 TRIM4Q9C037 500 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 CATSPERBQ9H7T0 1116 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 TMX2Q9Y320 296 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 LRRIQ1Q96JM4 1722 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 SLC37A4O43826 429 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 CDH16O75309 829 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 RPSAP08865 295 aaKnown RBP19.93■□□□□ 0.78
PTPRE-201ENST00000254667 HADHAP40939 763 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 GCLCP48506 637 aaPredicted RBP19.93■□□□□ 0.78
PTPRE-201ENST00000254667 TAF6P49848 677 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 MAPRE1Q15691 268 aaKnown RBP19.93■□□□□ 0.78
PTPRE-201ENST00000254667 COL23A1Q86Y22 540 aaPredicted RBP19.93■□□□□ 0.78
PTPRE-201ENST00000254667 SCFD1Q8WVM8 642 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 HPDLQ96IR7 371 aa19.93■□□□□ 0.78
PTPRE-201ENST00000254667 CCDC195A0A1B0GUA6 201 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 GYPCP04921 128 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 RPLP2P05387 115 aaKnown RBP19.92■□□□□ 0.78
PTPRE-201ENST00000254667 KITP10721 976 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 FCGRTP55899 365 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 SESN2P58004 480 aaPredicted RBP19.92■□□□□ 0.78
PTPRE-201ENST00000254667 RAB42Q8N4Z0 105 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 OSBPL8Q9BZF1 889 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 WWP1Q9H0M0 922 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 CELF2O95319 508 aaKnown RBP19.92■□□□□ 0.78
PTPRE-201ENST00000254667 IL1R1P14778 569 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 RGS2P41220 211 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 CACNB2Q08289 660 aaPredicted RBP19.92■□□□□ 0.78
PTPRE-201ENST00000254667 GRB10Q13322 594 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 EZH2Q15910 746 aaKnown RBP19.92■□□□□ 0.78
PTPRE-201ENST00000254667 GNASQ5JWF2 1037 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 GPAT2Q6NUI2 795 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 RNF217Q8TC41 542 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 DCUN1D1Q96GG9 259 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 RBM15Q96T37 977 aaKnown RBP eCLIP19.92■□□□□ 0.78
PTPRE-201ENST00000254667 TSPYL2Q9H2G4 693 aaPredicted RBP19.92■□□□□ 0.78
PTPRE-201ENST00000254667 ADARB2Q9NS39 739 aaKnown RBP19.92■□□□□ 0.78
PTPRE-201ENST00000254667 NSMCE4AQ9NXX6 385 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 RIMBP3CA6NJZ7 1639 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 RIMBP3BA6NNM3 1639 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 RIMBP3Q9UFD9 1639 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 PTPAQ15257 358 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 DACT3Q96B18 629 aaPredicted RBP19.92■□□□□ 0.78
PTPRE-201ENST00000254667 TSSK1BQ9BXA7 367 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 ADGRB1O14514 1584 aa19.92■□□□□ 0.78
PTPRE-201ENST00000254667 FGFR4P22455 802 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms