RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 FAM149B1Q96BN6 582 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 HPDLQ96IR7 371 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 DNAJC7Q99615 494 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 GANQ9H2C0 597 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 TMEM8AQ9HCN3 771 aa12.47□□□□□ -0.41
LIN28A-201ENST00000254231 MORC2Q9Y6X9 1032 aaPredicted RBP12.47□□□□□ -0.41
LIN28A-201ENST00000254231 GREB1LQ9C091 1923 aaPredicted RBP12.46□□□□□ -0.41
LIN28A-201ENST00000254231 SCNN1GP51170 649 aa12.46□□□□□ -0.41
LIN28A-201ENST00000254231 SNX17Q15036 470 aa12.46□□□□□ -0.41
LIN28A-201ENST00000254231 MRRFQ96E11 262 aaKnown RBP12.46□□□□□ -0.41
LIN28A-201ENST00000254231 PAAF1Q9BRP4 392 aa12.46□□□□□ -0.41
LIN28A-201ENST00000254231 PRMT7Q9NVM4 692 aaPredicted RBP12.46□□□□□ -0.41
LIN28A-201ENST00000254231 TJP2Q9UDY2 1190 aa12.46□□□□□ -0.41
LIN28A-201ENST00000254231 NAGPAQ9UK23 515 aa12.46□□□□□ -0.41
LIN28A-201ENST00000254231 H0YCG3 227 aa12.46□□□□□ -0.41
LIN28A-201ENST00000254231 SEC31AO94979 1220 aaKnown RBP12.46□□□□□ -0.41
LIN28A-201ENST00000254231 SLU7O95391 586 aaKnown RBP12.46□□□□□ -0.41
LIN28A-201ENST00000254231 GGCXP38435 758 aa12.46□□□□□ -0.41
LIN28A-201ENST00000254231 ATP11AP98196 1134 aa12.46□□□□□ -0.41
LIN28A-201ENST00000254231 PDCL2Q8N4E4 241 aa12.46□□□□□ -0.41
LIN28A-201ENST00000254231 UHMK1Q8TAS1 419 aaKnown RBP12.46□□□□□ -0.41
LIN28A-201ENST00000254231 CCDC51Q96ER9 411 aa12.46□□□□□ -0.41
LIN28A-201ENST00000254231 MED10Q9BTT4 135 aa12.46□□□□□ -0.41
LIN28A-201ENST00000254231 C2orf40Q9H1Z8 148 aa12.46□□□□□ -0.41
LIN28A-201ENST00000254231 SPEGQ15772 3267 aa12.46□□□□□ -0.41
LIN28A-201ENST00000254231 PAPPA2Q9BXP8 1791 aa12.46□□□□□ -0.42
LIN28A-201ENST00000254231 A6NJR5 290 aa12.46□□□□□ -0.42
LIN28A-201ENST00000254231 SLC16A3O15427 465 aaKnown RBP12.46□□□□□ -0.42
LIN28A-201ENST00000254231 SEPT4O43236 478 aa12.46□□□□□ -0.42
LIN28A-201ENST00000254231 FKTNO75072 461 aa12.46□□□□□ -0.42
LIN28A-201ENST00000254231 ALDH1A1P00352 501 aa12.46□□□□□ -0.42
LIN28A-201ENST00000254231 NSFP46459 744 aaKnown RBP12.46□□□□□ -0.42
LIN28A-201ENST00000254231 GATMP50440 423 aa12.46□□□□□ -0.42
LIN28A-201ENST00000254231 VAV2P52735 878 aa12.46□□□□□ -0.42
LIN28A-201ENST00000254231 PLCB3Q01970 1234 aa12.46□□□□□ -0.42
LIN28A-201ENST00000254231 C1orf131Q8NDD1 294 aaKnown RBP12.46□□□□□ -0.42
LIN28A-201ENST00000254231 STK33Q9BYT3 514 aa12.46□□□□□ -0.42
LIN28A-201ENST00000254231 CERS4Q9HA82 394 aa12.46□□□□□ -0.42
LIN28A-201ENST00000254231 DNAJC17Q9NVM6 304 aaKnown RBP12.46□□□□□ -0.42
LIN28A-201ENST00000254231 A8MXQ7 604 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 TLR3O15455 904 aaKnown RBP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 TSPAN1O60635 241 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 TRIP13Q15645 432 aaPredicted RBP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 SMTNL2Q2TAL5 461 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 SLC10A6Q3KNW5 377 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 IRF2BP2Q7Z5L9 587 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 RSPH3Q86UC2 560 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 AGPAT1Q99943 283 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 MTG1Q9BT17 334 aaPredicted RBP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 NAA15Q9BXJ9 866 aaKnown RBP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 PDZD7Q9H5P4 517 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 SIX2Q9NPC8 291 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 CISHQ9NSE2 258 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 DMAC2Q9NW81 257 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 DPP3Q9NY33 737 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 GNEQ9Y223 722 aaKnown RBP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 PTPN22Q9Y2R2 807 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 NRCAMQ92823 1304 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 ZNFX1Q9P2E3 1918 aaKnown RBP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 SPTBN2O15020 2390 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 FERP16591 822 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 ALCAMQ13740 583 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 BMT2Q1RMZ1 405 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 OTOP2Q7RTS6 562 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 TEX2Q8IWB9 1127 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 SLC35G2Q8TBE7 412 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 ZMAT2Q96NC0 199 aaKnown RBP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 TTYH3Q9C0H2 523 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 KATNBL1Q9H079 304 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 CNOT8Q9UFF9 292 aaKnown RBP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 SAR1BQ9Y6B6 198 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 F5P12259 2224 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 ZC3H11AO75152 810 aaKnown RBP eCLIP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 DUSP11O75319 330 aaKnown RBP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 LDHAP00338 332 aaKnown RBP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 FGFR1P11362 822 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 CYP11B1P15538 503 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 SMC1AQ14683 1233 aaKnown RBP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 SLC18A3Q16572 532 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 SDHAF4Q5VUM1 108 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 HGSNATQ68CP4 663 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 LNX1Q8TBB1 728 aaPredicted RBP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 DIS3LQ8TF46 1054 aaKnown RBP12.45□□□□□ -0.42
LIN28A-201ENST00000254231 C17orf75Q9HAS0 396 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 PDLIM7Q9NR12 457 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 ANAPC7Q9UJX3 599 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 MYO6Q9UM54 1294 aa12.45□□□□□ -0.42
LIN28A-201ENST00000254231 PSME4Q14997 1843 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 ITIH6Q6UXX5 1313 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 IGKV6D-21A0A0A0MT36 114 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 ATP2C2O75185 946 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 CYP2C18P33260 490 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 HLTFQ14527 1009 aaKnown RBP eCLIP12.44□□□□□ -0.42
LIN28A-201ENST00000254231 KCNT1Q5JUK3 1230 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 DSTYKQ6XUX3 929 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 ABI1Q8IZP0 508 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 ABRAQ8N0Z2 381 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 PCDHB18PQ96TA0 734 aa12.44□□□□□ -0.42
LIN28A-201ENST00000254231 NTPCRQ9BSD7 190 aaKnown RBP12.44□□□□□ -0.42
LIN28A-201ENST00000254231 PADI3Q9ULW8 664 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms