RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 ZFP69BQ9UJL9 534 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 IKBKGQ9Y6K9 419 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 IRS2Q9Y4H2 1338 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 EME2A4GXA9 379 aaPredicted RBP12.69□□□□□ -0.38
USHBP1-201ENST00000252597 PSMD10O75832 226 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 BASP1P80723 227 aaKnown RBP12.69□□□□□ -0.38
USHBP1-201ENST00000252597 MGAT5Q09328 741 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 ORC1Q13415 861 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 SPARCL1Q14515 664 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 BRDTQ58F21 947 aaPredicted RBP12.69□□□□□ -0.38
USHBP1-201ENST00000252597 CCDC33Q8N5R6 958 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 MAML1Q92585 1016 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 SERPINB12Q96P63 405 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 RAB3IPQ96QF0 476 aaPredicted RBP12.69□□□□□ -0.38
USHBP1-201ENST00000252597 EHMT1Q9H9B1 1298 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 TUFT1Q9NNX1 390 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 NYAP2Q9P242 653 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 GTF3C4Q9UKN8 822 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 DNPEPQ9ULA0 475 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 IGLV3-22A0A075B6J6 115 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 MAPK13O15264 365 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 MMP10P09238 476 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 POTEJP0CG39 1038 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 ITGB5P18084 799 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 CHRNA5P30532 468 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 WDR4P57081 412 aaKnown RBP12.68□□□□□ -0.38
USHBP1-201ENST00000252597 GAD2Q05329 585 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 DMP1Q13316 513 aaPredicted RBP12.68□□□□□ -0.38
USHBP1-201ENST00000252597 C11orf63Q6NUN7 778 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 PALM2Q8IXS6 379 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 CCDC89Q8N998 374 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 SPDYE1Q8NFV5 336 aaPredicted RBP12.68□□□□□ -0.38
USHBP1-201ENST00000252597 SEC14L1Q92503 715 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 SYNCQ9H7C4 482 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 ARMCX1Q9P291 453 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 GSTA1P08263 222 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 TAC1P20366 129 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 CDR2Q01850 454 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 BNIP1Q12981 228 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 MTMR1Q13613 665 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 UGCGQ16739 394 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 BMT2Q1RMZ1 405 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 MTERF2Q49AM1 385 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 PPP1R21Q6ZMI0 780 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 GBP7Q8N8V2 638 aaPredicted RBP12.68□□□□□ -0.38
USHBP1-201ENST00000252597 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.68□□□□□ -0.38
USHBP1-201ENST00000252597 GRK7Q8WTQ7 553 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 NAF1Q96HR8 494 aaKnown RBP12.68□□□□□ -0.38
USHBP1-201ENST00000252597 TXLNGQ9NUQ3 528 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 DLGAP2Q9P1A6 1054 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 UBR3Q6ZT12 1888 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 LRRIQ4A6NIV6 560 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 PECAM1P16284 738 aaPredicted RBP12.68□□□□□ -0.38
USHBP1-201ENST00000252597 ADRA1DP25100 572 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 LIG4P49917 911 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 FYB2Q5VWT5 728 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 MIS18BP1Q6P0N0 1132 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 LMNTD2Q8IXW0 634 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 PARD3BQ8TEW8 1205 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 RPS6KC1Q96S38 1066 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 DCLK3Q9C098 648 aa12.68□□□□□ -0.38
USHBP1-201ENST00000252597 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.68□□□□□ -0.38
USHBP1-201ENST00000252597 SEPT9Q9UHD8 586 aaPredicted RBP12.68□□□□□ -0.38
USHBP1-201ENST00000252597 MRPL11Q9Y3B7 192 aaKnown RBP12.68□□□□□ -0.38
USHBP1-201ENST00000252597 ATP2A1O14983 1001 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 ANXA13P27216 316 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 QARSP47897 775 aaKnown RBP12.67□□□□□ -0.38
USHBP1-201ENST00000252597 GCLCP48506 637 aaPredicted RBP12.67□□□□□ -0.38
USHBP1-201ENST00000252597 CTCFP49711 727 aaPredicted RBP12.67□□□□□ -0.38
USHBP1-201ENST00000252597 RARRES1P49788 294 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 RPL7AP62424 266 aaKnown RBP12.67□□□□□ -0.38
USHBP1-201ENST00000252597 MTMR2Q13614 643 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 CYP4A22Q5TCH4 519 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 LIN9Q5TKA1 542 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 ACAD10Q6JQN1 1059 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 ZBTB33Q86T24 672 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 CDR2LQ86X02 465 aaPredicted RBP12.67□□□□□ -0.38
USHBP1-201ENST00000252597 ARMC2Q8NEN0 867 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 STMN2Q93045 179 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 MKL1Q969V6 931 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 TBC1D10AQ9BXI6 508 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 SHCBP1LQ9BZQ2 653 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 IQCGQ9H095 443 aaKnown RBP12.67□□□□□ -0.38
USHBP1-201ENST00000252597 SRRM3A6NNA2 597 aaPredicted RBP12.67□□□□□ -0.38
USHBP1-201ENST00000252597 BAG6P46379 1132 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 YWHAGP61981 247 aaKnown RBP eCLIP12.67□□□□□ -0.38
USHBP1-201ENST00000252597 SLC1A5Q15758 541 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 BTNL9Q6UXG8 535 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 RHPN2Q8IUC4 686 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 PDCD7Q8N8D1 485 aaKnown RBP12.67□□□□□ -0.38
USHBP1-201ENST00000252597 ROPN1BQ9BZX4 212 aaPredicted RBP12.67□□□□□ -0.38
USHBP1-201ENST00000252597 ROPN1Q9HAT0 212 aaPredicted RBP12.67□□□□□ -0.38
USHBP1-201ENST00000252597 P4HBP07237 508 aaKnown RBP12.67□□□□□ -0.38
USHBP1-201ENST00000252597 PSEN1P49768 467 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 DRG2P55039 364 aaKnown RBP12.67□□□□□ -0.38
USHBP1-201ENST00000252597 CLUL1Q15846 466 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 TMEM154Q6P9G4 183 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 LMO3Q8TAP4 145 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 PYROXD1Q8WU10 500 aa12.67□□□□□ -0.38
USHBP1-201ENST00000252597 JDP2Q8WYK2 163 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms