RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 ACKR2O00590 384 aa26.87■■□□□ 1.89
TMEM55B-201ENST00000250489 SHOX2O60902 331 aaPredicted RBP26.87■■□□□ 1.89
TMEM55B-201ENST00000250489 GJB1P08034 283 aa26.87■■□□□ 1.89
TMEM55B-201ENST00000250489 HNRNPH2P55795 449 aaKnown RBP26.87■■□□□ 1.89
TMEM55B-201ENST00000250489 C2CD6Q53TS8 623 aa26.87■■□□□ 1.89
TMEM55B-201ENST00000250489 MPZL3Q6UWV2 235 aa26.87■■□□□ 1.89
TMEM55B-201ENST00000250489 TMC3Q7Z5M5 1100 aa26.87■■□□□ 1.89
TMEM55B-201ENST00000250489 C1orf131Q8NDD1 294 aaKnown RBP26.87■■□□□ 1.89
TMEM55B-201ENST00000250489 NLRP4Q96MN2 994 aa26.87■■□□□ 1.89
TMEM55B-201ENST00000250489 FZD8Q9H461 694 aa26.87■■□□□ 1.89
TMEM55B-201ENST00000250489 PTPRHQ9HD43 1115 aa26.87■■□□□ 1.89
TMEM55B-201ENST00000250489 MTUS1Q9ULD2 1270 aa26.87■■□□□ 1.89
TMEM55B-201ENST00000250489 THAP12O43422 761 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 SLC1A1P43005 524 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 DRG2P55039 364 aaKnown RBP26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 MTMR3Q13615 1198 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 LIN9Q5TKA1 542 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 ARMCX2Q7L311 632 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 PHF13Q86YI8 300 aaPredicted RBP26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 FAM212AQ96EL1 285 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 C11orf70Q9BRQ4 267 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 ZDHHC18Q9NUE0 388 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 H0YGN5 161 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 POTEJP0CG39 1038 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 MYL6P60660 151 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 DUOXA2Q1HG44 320 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 EFCAB12Q6NXP0 572 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 ZBTB10Q96DT7 871 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 VCPIP1Q96JH7 1222 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 ZNF668Q96K58 619 aaPredicted RBP26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 ADAM22Q9P0K1 906 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 PNMA3Q9UL41 463 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 NFS1Q9Y697 457 aa26.86■■□□□ 1.89
TMEM55B-201ENST00000250489 MYO1FO00160 1098 aa26.85■■□□□ 1.89
TMEM55B-201ENST00000250489 HOXC6P09630 235 aa26.85■■□□□ 1.89
TMEM55B-201ENST00000250489 RARAP10276 462 aa26.85■■□□□ 1.89
TMEM55B-201ENST00000250489 SSTR3P32745 418 aaPredicted RBP26.85■■□□□ 1.89
TMEM55B-201ENST00000250489 CLCN3P51790 818 aa26.85■■□□□ 1.89
TMEM55B-201ENST00000250489 ARHGAP1Q07960 439 aa26.85■■□□□ 1.89
TMEM55B-201ENST00000250489 ATF7IP2Q5U623 682 aa26.85■■□□□ 1.89
TMEM55B-201ENST00000250489 CCDC137Q6PK04 289 aaKnown RBP26.85■■□□□ 1.89
TMEM55B-201ENST00000250489 FMO2Q99518 471 aa26.85■■□□□ 1.89
TMEM55B-201ENST00000250489 INO80B-WBP1J3KQ70 363 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 PTP4A2Q12974 167 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 EAPPQ56P03 285 aaPredicted RBP26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 CEP85LQ5SZL2 805 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 KCTD16Q68DU8 428 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 PPP1R2P3Q6NXS1 205 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 SH2D3CQ8N5H7 860 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 C12orf50Q8NA57 414 aaPredicted RBP26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 GTF3C2Q8WUA4 911 aaPredicted RBP26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 PLVAPQ9BX97 442 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 INO80BQ9C086 356 aaPredicted RBP26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 RNPEPQ9H4A4 650 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 ERAP1Q9NZ08 941 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 B4GALT5O43286 388 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 C22orf31O95567 290 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 COILP38432 576 aaPredicted RBP26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 MBTD1Q05BQ5 628 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 ZNF568Q3ZCX4 644 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 SLC10A4Q96EP9 437 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 RUNDC3BQ96NL0 473 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 TXLNGYQ9BZA5 131 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 NIF3L1Q9GZT8 377 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 CALCOCO1Q9P1Z2 691 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 SNX24Q9Y343 169 aa26.84■■□□□ 1.89
TMEM55B-201ENST00000250489 PODXLO00592 558 aa26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 FSCN2O14926 492 aa26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 ASAP2O43150 1006 aa26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 PROSCO94903 275 aa26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 SKOR1P84550 965 aa26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 C1QBPQ07021 282 aaKnown RBP26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 DHX9Q08211 1270 aaKnown RBP26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 SGSM1Q2NKQ1 1148 aa26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 EEF1DP3Q658K8 133 aa26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 LRRC31Q6UY01 552 aa26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 MMS22LQ6ZRQ5 1243 aa26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 THNSL1Q8IYQ7 743 aa26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 GPRC5AQ8NFJ5 357 aa26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 UBLCP1Q8WVY7 318 aaPredicted RBP26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 ZNF606Q8WXB4 792 aa26.83■■□□□ 1.89
TMEM55B-201ENST00000250489 PPFIA2O75334 1257 aa26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 MAMLD1Q13495 774 aa26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 ZNF792Q3KQV3 632 aa26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 PLEKHA7Q6IQ23 1121 aa26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 ZDHHC24Q6UX98 284 aa26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 ATP6V1G3Q96LB4 118 aa26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 MINDY3Q9H8M7 445 aa26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 TMBIM4Q9HC24 238 aa26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 MRPL47Q9HD33 250 aaKnown RBP26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 GRHL1Q9NZI5 618 aa26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 FNTAP49354 379 aa26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 TFAMQ00059 246 aaKnown RBP26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 LAMC2Q13753 1193 aa26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 TAPT1Q6NXT6 567 aa26.82■■□□□ 1.88
TMEM55B-201ENST00000250489 ZNF844Q08AG5 666 aa26.81■■□□□ 1.88
TMEM55B-201ENST00000250489 TRPC3Q13507 836 aa26.81■■□□□ 1.88
TMEM55B-201ENST00000250489 ZNF484Q5JVG2 852 aa26.81■■□□□ 1.88
TMEM55B-201ENST00000250489 GJC2Q5T442 439 aaPredicted RBP26.81■■□□□ 1.88
TMEM55B-201ENST00000250489 CEP120Q8N960 986 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms