RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ANKRD63C9JTQ0 380 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 IGF2BP3O00425 579 aaKnown RBP eCLIP18.1■□□□□ 0.494e-8■■■■□ 24.7
FOXA1-201ENST00000250448 COMTP21964 271 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 PEX3P56589 373 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 SATB1Q01826 763 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 FAM133BQ5BKY9 247 aaKnown RBP18.1■□□□□ 0.49
FOXA1-201ENST00000250448 CEP120Q8N960 986 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 UNCXA6NJT0 531 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 EXOC3O60645 756 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 PEX5P50542 639 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 GPC5P78333 572 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 MESDQ14696 234 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 CYP1B1Q16678 543 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 MFSD5Q6N075 450 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 ART4Q93070 314 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 RUNDC3BQ96NL0 473 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 ABCF3Q9NUQ8 709 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 KCND2Q9NZV8 630 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 SLC16A4O15374 487 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 MARK3P27448 753 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 COILP38432 576 aaPredicted RBP18.09■□□□□ 0.49
FOXA1-201ENST00000250448 HSDL1Q3SXM5 330 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 CCDC38Q502W7 563 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 RPUSD2Q8IZ73 545 aaKnown RBP18.09■□□□□ 0.49
FOXA1-201ENST00000250448 RDM1Q8NG50 284 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 TCP11Q8WWU5 503 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 PASKQ96RG2 1323 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 PCYT2Q99447 389 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 ZNF302Q9NR11 478 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 CCNA1P78396 465 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 ARMCX2Q7L311 632 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 RASAL3Q86YV0 1011 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 ARHGEF19Q8IW93 802 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 CCDC105Q8IYK2 499 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 BSNDQ8WZ55 320 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 WNT8AQ9H1J5 351 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 UBE2TQ9NPD8 197 aaPredicted RBP18.09■□□□□ 0.49
FOXA1-201ENST00000250448 MTUS1Q9ULD2 1270 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 TCRBV7S2A1N4TA0A589 114 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 KIF1CO43896 1103 aaKnown RBP18.09■□□□□ 0.49
FOXA1-201ENST00000250448 PYGMP11217 842 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 PDE6CP51160 858 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 TLDC1Q6P9B6 456 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 TBC1D1Q86TI0 1168 aaPredicted RBP18.09■□□□□ 0.49
FOXA1-201ENST00000250448 ANKEF1Q9NU02 776 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 IVNS1ABPQ9Y6Y0 642 aa18.09■□□□□ 0.49
FOXA1-201ENST00000250448 LRRC37A2A6NM11 1700 aa18.08■□□□□ 0.49
FOXA1-201ENST00000250448 SNX3O60493 162 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 OAS1P00973 400 aaKnown RBP18.08■□□□□ 0.48
FOXA1-201ENST00000250448 TCF7P36402 384 aaPredicted RBP18.08■□□□□ 0.48
FOXA1-201ENST00000250448 MAP2K1Q02750 393 aaPredicted RBP18.08■□□□□ 0.48
FOXA1-201ENST00000250448 RIPK1Q13546 671 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 CCDC25Q86WR0 208 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 SLC13A5Q86YT5 568 aaPredicted RBP18.08■□□□□ 0.48
FOXA1-201ENST00000250448 SLC9A9Q8IVB4 645 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 RDH13Q8NBN7 331 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 SHCBP1Q8NEM2 672 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 MORC4Q8TE76 937 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 ROPN1BQ9BZX4 212 aaPredicted RBP18.08■□□□□ 0.48
FOXA1-201ENST00000250448 MAF1Q9H063 256 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 ROPN1Q9HAT0 212 aaPredicted RBP18.08■□□□□ 0.48
FOXA1-201ENST00000250448 LARSQ9P2J5 1176 aaKnown RBP18.08■□□□□ 0.48
FOXA1-201ENST00000250448 SUFUQ9UMX1 484 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 AGAP1Q9UPQ3 857 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 PTPN22Q9Y2R2 807 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 DOCK3Q8IZD9 2030 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 EMSYQ7Z589 1322 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 LOXHD1Q8IVV2 1947 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 RTN2O75298 545 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 MTA2O94776 668 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 CLTAP09496 248 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 OTUD6AQ7L8S5 288 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 SAPCD2Q86UD0 394 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 EXOC3L1Q86VI1 746 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 SYCP3Q8IZU3 236 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 CD101Q93033 1021 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 VTI1AQ96AJ9 217 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 TBC1D31Q96DN5 1066 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 PARK7Q99497 189 aaKnown RBP18.08■□□□□ 0.48
FOXA1-201ENST00000250448 CYP26B1Q9NR63 512 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 HOMER3Q9NSC5 361 aa18.08■□□□□ 0.48
FOXA1-201ENST00000250448 CHORDC1Q9UHD1 332 aaPredicted RBP18.08■□□□□ 0.48
FOXA1-201ENST00000250448 DCAF8L1A6NGE4 600 aa18.07■□□□□ 0.48
FOXA1-201ENST00000250448 UBOX5O94941 541 aa18.07■□□□□ 0.48
FOXA1-201ENST00000250448 TXNP10599 105 aaKnown RBP18.07■□□□□ 0.48
FOXA1-201ENST00000250448 PLS3P13797 630 aa18.07■□□□□ 0.48
FOXA1-201ENST00000250448 GPR142Q7Z601 462 aa18.07■□□□□ 0.48
FOXA1-201ENST00000250448 DYDC1Q8WWB3 177 aa18.07■□□□□ 0.48
FOXA1-201ENST00000250448 XPNPEP1Q9NQW7 623 aa18.07■□□□□ 0.48
FOXA1-201ENST00000250448 ATMINO43313 823 aaPredicted RBP18.07■□□□□ 0.48
FOXA1-201ENST00000250448 GCLCP48506 637 aaPredicted RBP18.07■□□□□ 0.48
FOXA1-201ENST00000250448 SIX1Q15475 284 aaPredicted RBP18.07■□□□□ 0.48
FOXA1-201ENST00000250448 CRELD2Q6UXH1 353 aaPredicted RBP18.07■□□□□ 0.48
FOXA1-201ENST00000250448 TRMT10CQ7L0Y3 403 aaKnown RBP18.07■□□□□ 0.48
FOXA1-201ENST00000250448 PCIF1Q9H4Z3 704 aa18.07■□□□□ 0.48
FOXA1-201ENST00000250448 SLC45A1Q9Y2W3 748 aa18.07■□□□□ 0.48
FOXA1-201ENST00000250448 PLXNB2O15031 1838 aa18.07■□□□□ 0.48
FOXA1-201ENST00000250448 RARAP10276 462 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 NCALDP61601 193 aa18.06■□□□□ 0.48
FOXA1-201ENST00000250448 DLG4P78352 724 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms