RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 DCLK3Q9C098 648 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 ZNF214Q9UL59 606 aaPredicted RBP10.78□□□□□ -0.68
COPB1-201ENST00000249923 AGAP1Q9UPQ3 857 aa10.78□□□□□ -0.68
COPB1-201ENST00000249923 MYH9P35579 1960 aaKnown RBP10.77□□□□□ -0.68
COPB1-201ENST00000249923 A0A1B0GUA9 196 aa10.77□□□□□ -0.68
COPB1-201ENST00000249923 ITGA8P53708 1063 aa10.77□□□□□ -0.68
COPB1-201ENST00000249923 ZACNQ401N2 412 aa10.77□□□□□ -0.68
COPB1-201ENST00000249923 SEZ6Q53EL9 994 aa10.77□□□□□ -0.68
COPB1-201ENST00000249923 CGB2Q6NT52 195 aa10.77□□□□□ -0.68
COPB1-201ENST00000249923 KLHL11Q9NVR0 708 aa10.77□□□□□ -0.68
COPB1-201ENST00000249923 EURLQ9NYK6 297 aa10.77□□□□□ -0.68
COPB1-201ENST00000249923 SAMD15Q9P1V8 674 aa10.77□□□□□ -0.68
COPB1-201ENST00000249923 TBK1Q9UHD2 729 aa10.77□□□□□ -0.68
COPB1-201ENST00000249923 PASKQ96RG2 1323 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 RASGRF2O14827 1237 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 RALAP11233 206 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 MAPK4P31152 587 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 SFNP31947 248 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 PRKCEQ02156 737 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 KYNUQ16719 465 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 PRAMEF18Q5VWM3 479 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 ANKLE1Q8NAG6 615 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 GDAP1Q8TB36 358 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 RSRC1Q96IZ7 334 aaKnown RBP10.77□□□□□ -0.69
COPB1-201ENST00000249923 PPP1R12CQ9BZL4 782 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 RNF146Q9NTX7 359 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 ABCF3Q9NUQ8 709 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 NEFHP12036 1026 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 ELF1P32519 619 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 EN1Q05925 392 aaPredicted RBP10.77□□□□□ -0.69
COPB1-201ENST00000249923 PTK6Q13882 451 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 PLCB4Q15147 1175 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 CLUL1Q15846 466 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 ABHD15Q6UXT9 468 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 TMEM130Q8N3G9 435 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 ANKS4BQ8N8V4 417 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 OR5B17Q8NGF7 314 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 ASAP3Q8TDY4 903 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 ZKSCAN4Q969J2 545 aaPredicted RBP10.77□□□□□ -0.69
COPB1-201ENST00000249923 CYP26B1Q9NR63 512 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 WHRNQ9P202 907 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 SLC12A4Q9UP95 1085 aa10.77□□□□□ -0.69
COPB1-201ENST00000249923 HLA-DRAP01903 254 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 GCAP28676 217 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 GTF2H1P32780 548 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 MAMLD1Q13495 774 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 C6orf118Q5T5N4 469 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 NBPF12Q5TAG4 269 aaPredicted RBP10.76□□□□□ -0.69
COPB1-201ENST00000249923 NAIF1Q69YI7 327 aaPredicted RBP10.76□□□□□ -0.69
COPB1-201ENST00000249923 TXNRD3NBQ6F5E7 133 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 RTKN2Q8IZC4 609 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 TMEM143Q96AN5 459 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 HVCN1Q96D96 273 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 IWS1Q96ST2 819 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 POLR3FQ9H1D9 316 aaPredicted RBP10.76□□□□□ -0.69
COPB1-201ENST00000249923 H0Y3Z8 333 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 RPL7AP62424 266 aaKnown RBP10.76□□□□□ -0.69
COPB1-201ENST00000249923 NOMO3P69849 1222 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 SLMAPQ14BN4 828 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 TMEM132BQ14DG7 1078 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 BRDTQ58F21 947 aaPredicted RBP10.76□□□□□ -0.69
COPB1-201ENST00000249923 SWT1Q5T5J6 900 aaKnown RBP10.76□□□□□ -0.69
COPB1-201ENST00000249923 PARP9Q8IXQ6 854 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 CCDC63Q8NA47 563 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 KIFAP3Q92845 792 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 CAMKK2Q96RR4 588 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 C11orf70Q9BRQ4 267 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 YIPF3Q9GZM5 350 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 AVENQ9NQS1 362 aaPredicted RBP10.76□□□□□ -0.69
COPB1-201ENST00000249923 INTS9Q9NV88 658 aaKnown RBP10.76□□□□□ -0.69
COPB1-201ENST00000249923 NINJ2Q9NZG7 142 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
COPB1-201ENST00000249923 NUB1Q9Y5A7 615 aa10.76□□□□□ -0.69
COPB1-201ENST00000249923 CNTNAP2Q9UHC6 1331 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 ASAP2O43150 1006 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 CD58P19256 250 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 KLRC2P26717 231 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 PSMC4P43686 418 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 ACTR2P61160 394 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 DRP2Q13474 957 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 CYB5D1Q6P9G0 228 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 SAMD7Q7Z3H4 446 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 TAB3Q8N5C8 712 aaPredicted RBP10.75□□□□□ -0.69
COPB1-201ENST00000249923 MAP3K20Q9NYL2 800 aaKnown RBP10.75□□□□□ -0.69
COPB1-201ENST00000249923 MTRF1LQ9UGC7 380 aaKnown RBP10.75□□□□□ -0.69
COPB1-201ENST00000249923 MTUS1Q9ULD2 1270 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 EXOC7Q9UPT5 735 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 STYXL1Q9Y6J8 313 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 BPTFQ12830 3046 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 TMEM120BA0PK00 339 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 CCT8L1PA6NM43 557 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 FAM189A1O60320 539 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 TTC4O95801 387 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 GARTP22102 1010 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 XRCC4Q13426 336 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 FAM47EQ6ZV65 393 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 SPDL1Q96EA4 605 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 FHDC1Q9C0D6 1143 aaPredicted RBP10.75□□□□□ -0.69
COPB1-201ENST00000249923 KDM4CQ9H3R0 1056 aa10.75□□□□□ -0.69
COPB1-201ENST00000249923 ADGRA2Q96PE1 1338 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms