RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 EIF3HO15372 352 aaKnown RBP eCLIP16.8■□□□□ 0.28
LRFN1-201ENST00000248668 CNMDO75829 334 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 WEE2P0C1S8 567 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 FGFR4P22455 802 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 SEC24CP53992 1094 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 MYL6P60660 151 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 LAMTOR4Q0VGL1 99 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 PPP1R7Q15435 360 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 TARBP2Q15633 366 aaKnown RBP16.8■□□□□ 0.28
LRFN1-201ENST00000248668 CGRRF1Q99675 332 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 CHST7Q9NS84 486 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 RASAL2Q9UJF2 1139 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 STYXL1Q9Y6J8 313 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 PPFIA4O75335 1185 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 MTA2O94776 668 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 CLTAP09496 248 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 TMOD1P28289 359 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 CHRNA3P32297 505 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 SGO2Q562F6 1265 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 ZDHHC24Q6UX98 284 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 ENOSF1Q7L5Y1 443 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 MTUS1Q9ULD2 1270 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 MCM3APO60318 1980 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 COILP38432 576 aaPredicted RBP16.8■□□□□ 0.28
LRFN1-201ENST00000248668 ORC1Q13415 861 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 SEC14L1Q92503 715 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 ZDHHC18Q9NUE0 388 aa16.8■□□□□ 0.28
LRFN1-201ENST00000248668 PRKCBP05771 671 aa16.79■□□□□ 0.28
LRFN1-201ENST00000248668 CYP2C8P10632 490 aa16.79■□□□□ 0.28
LRFN1-201ENST00000248668 EDNRBP24530 442 aa16.79■□□□□ 0.28
LRFN1-201ENST00000248668 CTNNA2P26232 953 aa16.79■□□□□ 0.28
LRFN1-201ENST00000248668 DHX34Q14147 1143 aaKnown RBP16.79■□□□□ 0.28
LRFN1-201ENST00000248668 IMPG2Q9BZV3 1241 aa16.79■□□□□ 0.28
LRFN1-201ENST00000248668 GRHL1Q9NZI5 618 aa16.79■□□□□ 0.28
LRFN1-201ENST00000248668 RBPJLQ9UBG7 517 aa16.79■□□□□ 0.28
LRFN1-201ENST00000248668 ZC3H11AO75152 810 aaKnown RBP eCLIP16.79■□□□□ 0.28
LRFN1-201ENST00000248668 MAFO75444 373 aaPredicted RBP16.79■□□□□ 0.28
LRFN1-201ENST00000248668 SLCO1A2P46721 670 aa16.79■□□□□ 0.28
LRFN1-201ENST00000248668 KCTD2Q14681 263 aa16.79■□□□□ 0.28
LRFN1-201ENST00000248668 CD302Q8IX05 232 aa16.79■□□□□ 0.28
LRFN1-201ENST00000248668 ACSF2Q96CM8 615 aaPredicted RBP16.79■□□□□ 0.28
LRFN1-201ENST00000248668 GPR20Q99678 358 aa16.79■□□□□ 0.28
LRFN1-201ENST00000248668 PPANQ9NQ55 473 aaKnown RBP16.79■□□□□ 0.28
LRFN1-201ENST00000248668 A0A0G2JLL6 359 aaPredicted RBP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 RFC5P40937 340 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 CLDN10P78369 228 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 SIX1Q15475 284 aaPredicted RBP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 ATP13A4Q4VNC1 1196 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 PRRT2Q7Z6L0 340 aaPredicted RBP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 PRUNE1Q86TP1 453 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 CCDC114Q96M63 670 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 FGD4Q96M96 766 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 FHDC1Q9C0D6 1143 aaPredicted RBP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 SEMA4AQ9H3S1 761 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 ZNF408Q9H9D4 720 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 NXF1Q9UBU9 619 aaKnown RBP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 SUFUQ9UMX1 484 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 ADGRA2Q96PE1 1338 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 FAM187AA6NFU0 413 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 PI4K2BG5E9Z4 385 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 SOCS7O14512 581 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 MSCO60682 206 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 ERLIN2O94905 339 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 LDHAP00338 332 aaKnown RBP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 KRT19P08727 400 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 TCF4P15884 667 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 TAS2R40P59535 323 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 MAGOHP61326 146 aaKnown RBP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 OPTNQ96CV9 577 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 MMP19Q99542 508 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 R3HDM2Q9Y2K5 976 aaKnown RBP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 NDUFAB1O14561 156 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 RPS6KA5O75582 802 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 TXNP10599 105 aaKnown RBP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 RPL7AP62424 266 aaKnown RBP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 NOMO3P69849 1222 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 SF3A3Q12874 501 aaKnown RBP eCLIP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 MTMR3Q13615 1198 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 MAPK6Q16659 721 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 EAPPQ56P03 285 aaPredicted RBP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 MON1BQ7L1V2 547 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 TMEM192Q8IY95 271 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 KAT2BQ92831 832 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 MRPL4Q9BYD3 311 aaKnown RBP16.78■□□□□ 0.28
LRFN1-201ENST00000248668 ASIC3Q9UHC3 531 aa16.78■□□□□ 0.28
LRFN1-201ENST00000248668 HMGB1P1B2RPK0 211 aaPredicted RBP16.77■□□□□ 0.28
LRFN1-201ENST00000248668 PMS2P54278 862 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 TCEAL1Q15170 157 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 FBXW10Q5XX13 1052 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 EEF1DP3Q658K8 133 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 KAZNQ674X7 775 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 KDM7AQ6ZMT4 941 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 CCDC91Q7Z6B0 441 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 ERO1BQ86YB8 467 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 ABRAQ8N0Z2 381 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 EIF1ADQ8N9N8 165 aaKnown RBP16.77■□□□□ 0.28
LRFN1-201ENST00000248668 RNF25Q96BH1 459 aaPredicted RBP16.77■□□□□ 0.28
LRFN1-201ENST00000248668 CDCA5Q96FF9 252 aa16.77■□□□□ 0.28
LRFN1-201ENST00000248668 ZBTB42B2RXF5 422 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms