RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ZNF568Q3ZCX4 644 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 GLIS1Q8NBF1 620 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 REPS2Q8NFH8 660 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 DYDC1Q8WWB3 177 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 JDP2Q8WYK2 163 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 SCLT1Q96NL6 688 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 PLVAPQ9BX97 442 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 WHRNQ9P202 907 aa27.19■■□□□ 1.94
RAB40C-201ENST00000248139 ATF2P15336 505 aa27.18■■□□□ 1.94
RAB40C-201ENST00000248139 MPP2Q14168 576 aa27.18■■□□□ 1.94
RAB40C-201ENST00000248139 MICALL2Q8IY33 904 aa27.18■■□□□ 1.94
RAB40C-201ENST00000248139 C17orf75Q9HAS0 396 aa27.18■■□□□ 1.94
RAB40C-201ENST00000248139 CYP39A1Q9NYL5 469 aa27.18■■□□□ 1.94
RAB40C-201ENST00000248139 COL11A1P12107 1806 aaPredicted RBP27.18■■□□□ 1.94
RAB40C-201ENST00000248139 TMEM120BA0PK00 339 aa27.18■■□□□ 1.94
RAB40C-201ENST00000248139 HGSO14964 777 aaPredicted RBP27.18■■□□□ 1.94
RAB40C-201ENST00000248139 THAP12O43422 761 aa27.18■■□□□ 1.94
RAB40C-201ENST00000248139 PROSCO94903 275 aa27.18■■□□□ 1.94
RAB40C-201ENST00000248139 CYP1A1P04798 512 aaPredicted RBP27.18■■□□□ 1.94
RAB40C-201ENST00000248139 TNFAIP8L3Q5GJ75 292 aa27.18■■□□□ 1.94
RAB40C-201ENST00000248139 CAMKK2Q96RR4 588 aa27.18■■□□□ 1.94
RAB40C-201ENST00000248139 SENP7Q9BQF6 1050 aa27.18■■□□□ 1.94
RAB40C-201ENST00000248139 RASSF9O75901 435 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 GLRA2P23416 452 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 CENPCQ03188 943 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 STRN3Q13033 797 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 MAMLD1Q13495 774 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 CUL2Q13617 745 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 PSMD6Q15008 389 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 PLCD3Q8N3E9 789 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 RUNDC3BQ96NL0 473 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 ZSCAN5DPP0CG00 497 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 FDX1P10109 184 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 ITIH2P19823 946 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 CNTN2Q02246 1040 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 DRP2Q13474 957 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 FAM133BQ5BKY9 247 aaKnown RBP27.17■■□□□ 1.94
RAB40C-201ENST00000248139 TRMT10CQ7L0Y3 403 aaKnown RBP27.17■■□□□ 1.94
RAB40C-201ENST00000248139 TMEM109Q9BVC6 243 aa27.17■■□□□ 1.94
RAB40C-201ENST00000248139 PPP1R1BQ9UD71 204 aaPredicted RBP27.17■■□□□ 1.94
RAB40C-201ENST00000248139 TLR3O15455 904 aaKnown RBP27.16■■□□□ 1.94
RAB40C-201ENST00000248139 PSMC4P43686 418 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 NOMO3P69849 1222 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 TNFAIP1Q13829 316 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 FAM212AQ96EL1 285 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 AVENQ9NQS1 362 aaPredicted RBP27.16■■□□□ 1.94
RAB40C-201ENST00000248139 NINJ2Q9NZG7 142 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 K7ERI5 159 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 TTC4O95801 387 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 PTK6Q13882 451 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 VSTM1Q6UX27 236 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 ENOSF1Q7L5Y1 443 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 PIGWQ7Z7B1 504 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 RBBP8NLQ8NC74 664 aaPredicted RBP27.16■■□□□ 1.94
RAB40C-201ENST00000248139 ZNF280CQ8ND82 737 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 RDM1Q8NG50 284 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 HAUS1Q96CS2 278 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 ADAM33Q9BZ11 813 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 OSBPL8Q9BZF1 889 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 FGFR1OP2Q9NVK5 253 aa27.16■■□□□ 1.94
RAB40C-201ENST00000248139 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.16■■□□□ 1.94
RAB40C-201ENST00000248139 CCT8L1PA6NM43 557 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 TCP11X1B4DZS4 312 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 CST3P01034 146 aaPredicted RBP27.15■■□□□ 1.94
RAB40C-201ENST00000248139 ETS1P14921 441 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 CYP4F22Q6NT55 531 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 ATL2Q8NHH9 583 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 ZNF668Q96K58 619 aaPredicted RBP27.15■■□□□ 1.94
RAB40C-201ENST00000248139 MSTO1Q9BUK6 570 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 ABCF3Q9NUQ8 709 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 GAS8O95995 478 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 PTPRAP18433 802 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 RXRBP28702 533 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 TNFSF9P41273 254 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 KLF1Q13351 362 aaPredicted RBP27.15■■□□□ 1.94
RAB40C-201ENST00000248139 CAPN12Q6ZSI9 719 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 GSTA5Q7RTV2 222 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 ARMC9Q7Z3E5 817 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 DEPTORQ8TB45 409 aa27.15■■□□□ 1.94
RAB40C-201ENST00000248139 MYH9P35579 1960 aaKnown RBP27.15■■□□□ 1.94
RAB40C-201ENST00000248139 GMPSP49915 693 aaPredicted RBP27.14■■□□□ 1.94
RAB40C-201ENST00000248139 ZKSCAN8Q15776 578 aaPredicted RBP27.14■■□□□ 1.94
RAB40C-201ENST00000248139 ZBTB33Q86T24 672 aa27.14■■□□□ 1.94
RAB40C-201ENST00000248139 FUKQ8N0W3 1084 aa27.14■■□□□ 1.94
RAB40C-201ENST00000248139 ABRAQ8N0Z2 381 aa27.14■■□□□ 1.94
RAB40C-201ENST00000248139 SLCO2A1Q92959 643 aa27.14■■□□□ 1.94
RAB40C-201ENST00000248139 SUPT20HL2P0C7V6 817 aa27.14■■□□□ 1.94
RAB40C-201ENST00000248139 NOP14P78316 857 aaKnown RBP27.14■■□□□ 1.94
RAB40C-201ENST00000248139 SUPT20HL1Q3ZLR7 823 aa27.14■■□□□ 1.94
RAB40C-201ENST00000248139 XKR3Q5GH77 459 aa27.14■■□□□ 1.94
RAB40C-201ENST00000248139 ZNF772Q68DY9 489 aaPredicted RBP27.14■■□□□ 1.94
RAB40C-201ENST00000248139 TAOK1Q7L7X3 1001 aa27.14■■□□□ 1.94
RAB40C-201ENST00000248139 FHDC1Q9C0D6 1143 aaPredicted RBP27.14■■□□□ 1.94
RAB40C-201ENST00000248139 SAMD15Q9P1V8 674 aa27.14■■□□□ 1.94
RAB40C-201ENST00000248139 ATF7P17544 494 aaPredicted RBP27.13■■□□□ 1.93
RAB40C-201ENST00000248139 IZUMO3Q5VZ72 239 aa27.13■■□□□ 1.93
RAB40C-201ENST00000248139 TXNRD3NBQ6F5E7 133 aa27.13■■□□□ 1.93
RAB40C-201ENST00000248139 MFSD5Q6N075 450 aa27.13■■□□□ 1.93
RAB40C-201ENST00000248139 ZNF365Q70YC5 407 aa27.13■■□□□ 1.93
RAB40C-201ENST00000248139 ACTR5Q9H9F9 607 aaPredicted RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms