RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 ANKRD40Q6AI12 368 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 INPP5DQ92835 1189 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 HEG1Q9ULI3 1381 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 TMEM120BA0PK00 339 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 ENO4A6NNW6 628 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 SFI1A8K8P3 1242 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 PDXKO00764 312 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 KCNN4O15554 427 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 ALX1Q15699 326 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 FBXW10Q5XX13 1052 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 MB21D2Q8IYB1 491 aaPredicted RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 TJP2Q9UDY2 1190 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 DNAJC5BQ9UF47 199 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 CFAP99D6REC4 459 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 PSMD14O00487 310 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 PPP1R36Q96LQ0 422 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 TIPINQ9BVW5 301 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 CXorf56Q9H5V9 222 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 RBAKQ9NYW8 714 aaPredicted RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 TNPO2O14787 897 aaKnown RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 RALAP11233 206 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 SOX6P35712 828 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 USP11P51784 963 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 CLEC17AQ6ZS10 378 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 MICU2Q8IYU8 434 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 LATS2Q9NRM7 1088 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 BRWD1Q9NSI6 2320 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 SSU72P8A0A1W2PR75 194 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 DLGAP3O95886 979 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 DUOXA2Q1HG44 320 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 SYTL3Q4VX76 610 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 PIK3R5Q8WYR1 880 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 ANKRD27Q96NW4 1050 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 XPO6Q96QU8 1125 aaKnown RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 STK33Q9BYT3 514 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 BRD8Q9H0E9 1235 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 PSD3Q9NYI0 1048 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 TCF3P15923 654 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 CCDC144BQ3MJ40 725 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 BBS7Q8IWZ6 715 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 AFF4Q9UHB7 1163 aaKnown RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 ABCA8O94911 1581 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 USP17L15C9J2P7 530 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 USP17L13C9JLJ4 530 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 USP17L11C9JVI0 530 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 USP17L18D6R9N7 530 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 USP17L22D6RA61 530 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 USP17L17D6RBQ6 530 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 USP17L19D6RCP7 530 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 USP17L20D6RJB6 530 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 CAPZA2P47755 286 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 PLOD1Q02809 727 aaPredicted RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 USP17L24Q0WX57 530 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 PIGHQ14442 188 aaPredicted RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 TTLL4Q14679 1199 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 USP17L6PQ6QN14 398 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 PRPF39Q86UA1 669 aaKnown RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 IL17RAQ96F46 866 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 TNIP3Q96KP6 325 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 COA1Q9GZY4 146 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 UNC45AQ9H3U1 944 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 C20orf96Q9NUD7 363 aaPredicted RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 RIC8BQ9NVN3 520 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 NME3Q13232 169 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 ANO4Q32M45 955 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 EDRF1Q3B7T1 1238 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 VPS37AQ8NEZ2 397 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 FAR2Q96K12 515 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 BBS2Q9BXC9 721 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 ROPN1BQ9BZX4 212 aaPredicted RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 ROPN1Q9HAT0 212 aaPredicted RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 SCN3BQ9NY72 215 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 VHLP40337 213 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 ATP2C1P98194 919 aaPredicted RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 RASGRP2Q7LDG7 609 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 SEC31BQ9NQW1 1179 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 PHF20L1A8MW92 1017 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 GH2P01242 217 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 TRIM71Q2Q1W2 868 aaKnown RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 SPDYAQ5MJ70 313 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 ZNF473Q8WTR7 871 aaKnown RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 SEC16BQ96JE7 1060 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 ALDH8A1Q9H2A2 487 aaPredicted RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 PDS5AQ29RF7 1337 aaKnown RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 CYP2E1P05181 493 aaPredicted RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 SCP2P22307 547 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 STILQ15468 1287 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 ZNF394Q53GI3 561 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 GPR141Q7Z602 305 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 KRCC1Q9NPI7 259 aaPredicted RBP7.07□□□□□ -1.28
CSMD2-201ENST00000241312 TUBGCP4Q9UGJ1 667 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 POLIQ9UNA4 740 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 MYH3P11055 1940 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 TRIM66O15016 1216 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 HIST1H2AGP0C0S8 130 aaPredicted RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 HIST1H2ADP20671 130 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 SLC18A3Q16572 532 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 ERFEQ4G0M1 354 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 VPS50Q96JG6 964 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 HIST1H2AHQ96KK5 128 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms