RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 TATDN2Q93075 761 aa26.59■■□□□ 1.85
RUNDC3A-201ENST00000225441 ZNF653Q96CK0 615 aa26.59■■□□□ 1.85
RUNDC3A-201ENST00000225441 KIAA1586Q9HCI6 787 aa26.59■■□□□ 1.85
RUNDC3A-201ENST00000225441 RAB20Q9NX57 234 aa26.59■■□□□ 1.85
RUNDC3A-201ENST00000225441 WHRNQ9P202 907 aa26.59■■□□□ 1.85
RUNDC3A-201ENST00000225441 DOCK5Q9H7D0 1870 aa26.59■■□□□ 1.85
RUNDC3A-201ENST00000225441 FSCN2O14926 492 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 ARIH2O95376 493 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 PYGMP11217 842 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 ADSSP30520 456 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 SLC1A1P43005 524 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 NPTX2P47972 431 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 SP4Q02446 784 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 MAP2K1Q02750 393 aaPredicted RBP26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 ACTN3Q08043 901 aaPredicted RBP26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 MAP2K5Q13163 448 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 ICE2Q659A1 982 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 CCDC121Q6ZUS5 278 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 ADAT2Q7Z6V5 191 aaKnown RBP26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 SLC47A2Q86VL8 602 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 NPLOC4Q8TAT6 608 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 XPO6Q96QU8 1125 aaKnown RBP26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 VTA1Q9NP79 307 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 DDX20Q9UHI6 824 aaKnown RBP26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 TELO2Q9Y4R8 837 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 MCM3APO60318 1980 aa26.58■■□□□ 1.85
RUNDC3A-201ENST00000225441 TMEM110-MUSTN1A8MSY1 372 aa26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 FARP2O94887 1054 aaPredicted RBP26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 PSAPP07602 524 aa26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 MMEP08473 750 aa26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 BPIFB4P59827 614 aa26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 UGCGQ16739 394 aa26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 LY6KQ17RY6 165 aa26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 GKAP1Q5VSY0 366 aaPredicted RBP26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 PPP1R2P3Q6NXS1 205 aa26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 CBWD2Q8IUF1 395 aa26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 CACNA2D3Q8IZS8 1091 aa26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 DDX1Q92499 740 aaKnown RBP26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 SEMA4DQ92854 862 aa26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 KAT5Q92993 513 aa26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 RNF25Q96BH1 459 aaPredicted RBP26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 CCDC134Q9H6E4 229 aa26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 KMT5AQ9NQR1 393 aa26.58■■□□□ 1.84
RUNDC3A-201ENST00000225441 CAND2O75155 1236 aa26.57■■□□□ 1.84
RUNDC3A-201ENST00000225441 CYP24A1Q07973 514 aa26.57■■□□□ 1.84
RUNDC3A-201ENST00000225441 SIX1Q15475 284 aaPredicted RBP26.57■■□□□ 1.84
RUNDC3A-201ENST00000225441 CLEC16AQ2KHT3 1053 aa26.57■■□□□ 1.84
RUNDC3A-201ENST00000225441 BRDTQ58F21 947 aaPredicted RBP26.57■■□□□ 1.84
RUNDC3A-201ENST00000225441 MFSD5Q6N075 450 aa26.57■■□□□ 1.84
RUNDC3A-201ENST00000225441 TTC27Q6P3X3 843 aa26.57■■□□□ 1.84
RUNDC3A-201ENST00000225441 CCDC62Q6P9F0 684 aa26.57■■□□□ 1.84
RUNDC3A-201ENST00000225441 ABHD15Q6UXT9 468 aa26.57■■□□□ 1.84
RUNDC3A-201ENST00000225441 CCDC105Q8IYK2 499 aa26.57■■□□□ 1.84
RUNDC3A-201ENST00000225441 CAPN7Q9Y6W3 813 aa26.57■■□□□ 1.84
RUNDC3A-201ENST00000225441 RGS16O15492 202 aaPredicted RBP26.56■■□□□ 1.84
RUNDC3A-201ENST00000225441 ECEL1O95672 775 aa26.56■■□□□ 1.84
RUNDC3A-201ENST00000225441 TMOD1P28289 359 aa26.56■■□□□ 1.84
RUNDC3A-201ENST00000225441 MARCKSL1P49006 195 aa26.56■■□□□ 1.84
RUNDC3A-201ENST00000225441 CAV1Q03135 178 aa26.56■■□□□ 1.84
RUNDC3A-201ENST00000225441 TNFAIP8L3Q5GJ75 292 aa26.56■■□□□ 1.84
RUNDC3A-201ENST00000225441 MIS18BP1Q6P0N0 1132 aa26.56■■□□□ 1.84
RUNDC3A-201ENST00000225441 MCPH1Q8NEM0 835 aa26.56■■□□□ 1.84
RUNDC3A-201ENST00000225441 CHMP6Q96FZ7 201 aa26.56■■□□□ 1.84
RUNDC3A-201ENST00000225441 SEC16BQ96JE7 1060 aa26.56■■□□□ 1.84
RUNDC3A-201ENST00000225441 HOMER3Q9NSC5 361 aa26.56■■□□□ 1.84
RUNDC3A-201ENST00000225441 ANKRD63C9JTQ0 380 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 SUPT20HL2P0C7V6 817 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 PTP4A2Q12974 167 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 IFT88Q13099 833 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 LACTB2Q53H82 288 aaPredicted RBP26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 METTL7BQ6UX53 244 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 PSPC1Q8WXF1 523 aaKnown RBP26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 USP6NLQ92738 828 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 ATP6V0A1Q93050 837 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 TINF2Q9BSI4 451 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 PDGFCQ9NRA1 345 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 GABBR1Q9UBS5 961 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 GOLGA6L7A0A1B0GV03 622 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 DENND3A2RUS2 1198 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 TNPO2O14787 897 aaKnown RBP26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 ATG7O95352 703 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 SNAI1O95863 264 aaPredicted RBP26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 HOXC6P09630 235 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 RARAP10276 462 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 CALCOCO2Q13137 446 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 TTLL4Q14679 1199 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 RNF187Q5TA31 235 aaPredicted RBP26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 SMYD5Q6GMV2 418 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 TAPT1Q6NXT6 567 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 ZDHHC14Q8IZN3 488 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 GPD1LQ8N335 351 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 GRK7Q8WTQ7 553 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 BBXQ8WY36 941 aaPredicted RBP26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 CABS1Q96KC9 395 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 CEP89Q96ST8 783 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 KATNBL1Q9H079 304 aa26.55■■□□□ 1.84
RUNDC3A-201ENST00000225441 GOLGA8IPA6NC78 632 aa26.54■■□□□ 1.84
RUNDC3A-201ENST00000225441 GOLGA8JA6NMD2 632 aa26.54■■□□□ 1.84
RUNDC3A-201ENST00000225441 H0YHG0 523 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms