RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 LRRC52Q8N7C0 313 aa17.82■□□□□ 0.44
CHMP5-201ENST00000223500 CPLX3Q8WVH0 158 aa17.82■□□□□ 0.44
CHMP5-201ENST00000223500 TOP1MTQ969P6 601 aa17.82■□□□□ 0.44
CHMP5-201ENST00000223500 DDX27Q96GQ7 796 aaKnown RBP17.82■□□□□ 0.44
CHMP5-201ENST00000223500 ZNF560Q96MR9 790 aa17.82■□□□□ 0.44
CHMP5-201ENST00000223500 UROC1Q96N76 676 aa17.82■□□□□ 0.44
CHMP5-201ENST00000223500 PI4K2AQ9BTU6 479 aa17.82■□□□□ 0.44
CHMP5-201ENST00000223500 GANQ9H2C0 597 aa17.82■□□□□ 0.44
CHMP5-201ENST00000223500 MTIF3Q9H2K0 278 aaKnown RBP17.82■□□□□ 0.44
CHMP5-201ENST00000223500 SIX2Q9NPC8 291 aa17.82■□□□□ 0.44
CHMP5-201ENST00000223500 CAPN11Q9UMQ6 739 aa17.82■□□□□ 0.44
CHMP5-201ENST00000223500 PLAGL2Q9UPG8 496 aa17.82■□□□□ 0.44
CHMP5-201ENST00000223500 LUC7L2Q9Y383 392 aaKnown RBP17.82■□□□□ 0.44
CHMP5-201ENST00000223500 SCN1AP35498 2009 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 FNDC1Q4ZHG4 1894 aaPredicted RBP17.81■□□□□ 0.44
CHMP5-201ENST00000223500 AKR1B15C9JRZ8 316 aaPredicted RBP17.81■□□□□ 0.44
CHMP5-201ENST00000223500 NOL4O94818 638 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 STAU1O95793 577 aaKnown RBP17.81■□□□□ 0.44
CHMP5-201ENST00000223500 GYPCP04921 128 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 P4HA1P13674 534 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 ZNF667Q5HYK9 610 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 TMEM240Q5SV17 173 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 DPY19L2P1Q6NXN4 242 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 C16orf59Q7L2K0 433 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 ENOSF1Q7L5Y1 443 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 CNGA4Q8IV77 575 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 PPM1KQ8N3J5 372 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 CXorf38Q8TB03 319 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 HPDLQ96IR7 371 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 FAXDC2Q96IV6 333 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 TTYH3Q9C0H2 523 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 VRTNQ9H8Y1 702 aa17.81■□□□□ 0.44
CHMP5-201ENST00000223500 UBE2TQ9NPD8 197 aaPredicted RBP17.81■□□□□ 0.44
CHMP5-201ENST00000223500 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.81■□□□□ 0.44
CHMP5-201ENST00000223500 ANO9A1A5B4 782 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 TBKBP1A7MCY6 615 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 PIRO00625 290 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 LRRN2O75325 713 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 TBXAS1P24557 533 aaPredicted RBP17.8■□□□□ 0.44
CHMP5-201ENST00000223500 CASP14P31944 242 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 MFAP3P55082 362 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 ZBED6P86452 979 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 SOX4Q06945 474 aaPredicted RBP17.8■□□□□ 0.44
CHMP5-201ENST00000223500 NAB2Q15742 525 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 TSR1Q2NL82 804 aaKnown RBP17.8■□□□□ 0.44
CHMP5-201ENST00000223500 PHLDB3Q6NSJ2 640 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 CASD1Q96PB1 797 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 SPAG5Q96R06 1193 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 NUCKS1Q9H1E3 243 aaKnown RBP17.8■□□□□ 0.44
CHMP5-201ENST00000223500 NLRC4Q9NPP4 1024 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 TBC1D13Q9NVG8 400 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 DNAJC12Q9UKB3 198 aa17.8■□□□□ 0.44
CHMP5-201ENST00000223500 EPHB6O15197 1021 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 KRT9P35527 623 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 TAF6P49848 677 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 DEFB103AP81534 67 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 APBA1Q02410 837 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 GCNT1Q02742 428 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 RAPGEF1Q13905 1077 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 SV2CQ496J9 727 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 IQCEQ6IPM2 695 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 FMNL3Q8IVF7 1028 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 ARHGEF19Q8IW93 802 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 HERVK_113Q902F9 699 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 TATDN2Q93075 761 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.79■□□□□ 0.44
CHMP5-201ENST00000223500 STK33Q9BYT3 514 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 NIF3L1Q9GZT8 377 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 XYLT2Q9H1B5 865 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 GOLGA2P5Q9HBQ8 144 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 FHOD1Q9Y613 1164 aa17.79■□□□□ 0.44
CHMP5-201ENST00000223500 CASTOR2A6NHX0 329 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 PODXLO00592 558 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 DGKIO75912 1065 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 PAX3P23760 479 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 FXR1P51114 621 aaKnown RBP eCLIP17.78■□□□□ 0.44
CHMP5-201ENST00000223500 EPHB4P54760 987 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 TNNC1P63316 161 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 WDR72Q3MJ13 1102 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 SPOPLQ6IQ16 392 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 GJB7Q6PEY0 223 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 RRAGAQ7L523 313 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 CCDC186Q7Z3E2 898 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 LRRC43Q8N309 656 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 JAKMIP2Q96AA8 810 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 APOBEC3GQ9HC16 384 aaKnown RBP17.78■□□□□ 0.44
CHMP5-201ENST00000223500 PCDH10Q9P2E7 1040 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 NXF1Q9UBU9 619 aaKnown RBP17.78■□□□□ 0.44
CHMP5-201ENST00000223500 MYO6Q9UM54 1294 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 NUB1Q9Y5A7 615 aa17.78■□□□□ 0.44
CHMP5-201ENST00000223500 MFAP3LO75121 409 aa17.77■□□□□ 0.44
CHMP5-201ENST00000223500 GATMP50440 423 aa17.77■□□□□ 0.44
CHMP5-201ENST00000223500 CLCNKBP51801 687 aa17.77■□□□□ 0.44
CHMP5-201ENST00000223500 YWHAEP62258 255 aaKnown RBP17.77■□□□□ 0.44
CHMP5-201ENST00000223500 DSC1Q08554 894 aa17.77■□□□□ 0.44
CHMP5-201ENST00000223500 CUL2Q13617 745 aa17.77■□□□□ 0.44
CHMP5-201ENST00000223500 UPP1Q16831 310 aa17.77■□□□□ 0.44
CHMP5-201ENST00000223500 ARHGAP44Q17R89 818 aa17.77■□□□□ 0.44
CHMP5-201ENST00000223500 SCARA3Q6AZY7 606 aa17.77■□□□□ 0.44
CHMP5-201ENST00000223500 TMEM130Q8N3G9 435 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms