RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 RIPK1Q13546 671 aa13.98□□□□□ -0.17
PLOD3-201ENST00000223127 BRDTQ58F21 947 aaPredicted RBP13.98□□□□□ -0.17
PLOD3-201ENST00000223127 FAM133BQ5BKY9 247 aaKnown RBP13.98□□□□□ -0.17
PLOD3-201ENST00000223127 C2orf69Q8N8R5 385 aa13.98□□□□□ -0.17
PLOD3-201ENST00000223127 PARD3BQ8TEW8 1205 aa13.98□□□□□ -0.17
PLOD3-201ENST00000223127 HES6Q96HZ4 224 aa13.98□□□□□ -0.17
PLOD3-201ENST00000223127 TARS2Q9BW92 718 aaKnown RBP13.98□□□□□ -0.17
PLOD3-201ENST00000223127 ABCF3Q9NUQ8 709 aa13.98□□□□□ -0.17
PLOD3-201ENST00000223127 TRPC6Q9Y210 931 aa13.98□□□□□ -0.17
PLOD3-201ENST00000223127 IVNS1ABPQ9Y6Y0 642 aa13.98□□□□□ -0.17
PLOD3-201ENST00000223127 FOXN3O00409 490 aaPredicted RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 SKAP2O75563 359 aaPredicted RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 CLTAP09496 248 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 SRGAP2CP0DJJ0 459 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 ARL2P36404 184 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 SNRPFP62306 86 aaKnown RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 SEZ6Q53EL9 994 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 UBAP2Q5T6F2 1119 aaKnown RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 TBC1D1Q86TI0 1168 aaPredicted RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 GLYCTKQ8IVS8 523 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 PRPF31Q8WWY3 499 aaKnown RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 GPR88Q9GZN0 384 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 L3MBTL1Q9Y468 752 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 BZW2Q9Y6E2 419 aaKnown RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 PPP1R12AO14974 1030 aaPredicted RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 GJB1P08034 283 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 FERP16591 822 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 TARBP2Q15633 366 aaKnown RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 DCAF12L1Q5VU92 463 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 CCDC62Q6P9F0 684 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 DAAM2Q86T65 1068 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 GPD1LQ8N335 351 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 PPM1KQ8N3J5 372 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 AGAP11Q8TF27 550 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 U2AF1L4Q8WU68 220 aaKnown RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 SEMA4DQ92854 862 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 THOC1Q96FV9 657 aaKnown RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 CFAP73A6NFT4 308 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 FGGP02679 453 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 EDN1P05305 212 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 PRKCIP41743 596 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 NAMPTP43490 491 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 IGBP1P78318 339 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 CAPSQ13938 189 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 TTLL4Q14679 1199 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 EPC2Q52LR7 807 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 NAIF1Q69YI7 327 aaPredicted RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 TRPM8Q7Z2W7 1104 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 RNF25Q96BH1 459 aaPredicted RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 PGM2Q96G03 612 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 PTPN18Q99952 460 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 ELAC2Q9BQ52 826 aaKnown RBP13.97□□□□□ -0.17
PLOD3-201ENST00000223127 ARID2Q68CP9 1835 aa13.97□□□□□ -0.17
PLOD3-201ENST00000223127 A0A0A6YYK5 440 aaPredicted RBP13.96□□□□□ -0.17
PLOD3-201ENST00000223127 SMIM23A6NLE4 172 aa13.96□□□□□ -0.17
PLOD3-201ENST00000223127 DDX3XO00571 662 aaKnown RBP eCLIP13.96□□□□□ -0.171e-17■■■■■ 29.4
PLOD3-201ENST00000223127 NLRP11P59045 1033 aaKnown RBP13.96□□□□□ -0.17
PLOD3-201ENST00000223127 PTENP60484 403 aa13.96□□□□□ -0.17
PLOD3-201ENST00000223127 CYP24A1Q07973 514 aa13.96□□□□□ -0.17
PLOD3-201ENST00000223127 DUPD1Q68J44 220 aa13.96□□□□□ -0.17
PLOD3-201ENST00000223127 VPS36Q86VN1 386 aa13.96□□□□□ -0.17
PLOD3-201ENST00000223127 SHCBP1Q8NEM2 672 aa13.96□□□□□ -0.17
PLOD3-201ENST00000223127 TAS1R2Q8TE23 839 aa13.96□□□□□ -0.17
PLOD3-201ENST00000223127 RAB17Q9H0T7 212 aa13.96□□□□□ -0.17
PLOD3-201ENST00000223127 ERVK-5Q9HDB9 667 aa13.96□□□□□ -0.17
PLOD3-201ENST00000223127 ASB14A6NK59 587 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 TTLL13PA6NNM8 815 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 H2AFZP0C0S5 128 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 RFC5P40937 340 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 PMS2P54278 862 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 NCALDP61601 193 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 KCNJ2P63252 427 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 IFI35P80217 286 aaPredicted RBP13.96□□□□□ -0.18
PLOD3-201ENST00000223127 ZBTB41Q5SVQ8 909 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 H2AFVQ71UI9 128 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 DPP9Q86TI2 863 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 OLIG1Q8TAK6 271 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 TMEM174Q8WUU8 243 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 ZNF570Q96NI8 536 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 PRMT1Q99873 361 aaKnown RBP13.96□□□□□ -0.18
PLOD3-201ENST00000223127 PI4K2AQ9BTU6 479 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 HAPLN2Q9GZV7 340 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 CCDC134Q9H6E4 229 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 ACP6Q9NPH0 428 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 SAMD15Q9P1V8 674 aa13.96□□□□□ -0.18
PLOD3-201ENST00000223127 H0YCG3 227 aa13.95□□□□□ -0.18
PLOD3-201ENST00000223127 DDX3YO15523 660 aaKnown RBP13.95□□□□□ -0.18
PLOD3-201ENST00000223127 MAFO75444 373 aaPredicted RBP13.95□□□□□ -0.18
PLOD3-201ENST00000223127 ANP32DO95626 131 aa13.95□□□□□ -0.18
PLOD3-201ENST00000223127 ALADP13716 330 aa13.95□□□□□ -0.18
PLOD3-201ENST00000223127 CCNHP51946 323 aaPredicted RBP13.95□□□□□ -0.18
PLOD3-201ENST00000223127 SPRYD7Q5W111 196 aa13.95□□□□□ -0.18
PLOD3-201ENST00000223127 KRT39Q6A163 491 aa13.95□□□□□ -0.18
PLOD3-201ENST00000223127 ZDHHC24Q6UX98 284 aa13.95□□□□□ -0.18
PLOD3-201ENST00000223127 LNX1Q8TBB1 728 aaPredicted RBP13.95□□□□□ -0.18
PLOD3-201ENST00000223127 PABPC3Q9H361 631 aaKnown RBP13.95□□□□□ -0.18
PLOD3-201ENST00000223127 NMRK2Q9NPI5 230 aa13.95□□□□□ -0.18
PLOD3-201ENST00000223127 AGO2Q9UKV8 859 aaKnown RBP13.95□□□□□ -0.18
PLOD3-201ENST00000223127 TTC7AQ9ULT0 858 aaPredicted RBP13.95□□□□□ -0.18
PLOD3-201ENST00000223127 MAPK13O15264 365 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms